RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 KHDRBS2Q5VWX1 349 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 GPRIN3Q6ZVF9 776 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 MRGPREQ86SM8 312 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 SATL1Q86VE3 508 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 RNF175Q8N4F7 328 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 APOBEC4Q8WW27 367 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 TTC9Q92623 222 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 KCNC2Q96PR1 638 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 OR51B5Q9H339 312 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 TRPS1Q9UHF7 1281 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 ZNF225Q9UK10 706 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 MAGEB17A8MXT2 336 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 IDSB3KWA1 339 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 ERVH48-1M5A8F1 160 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 FOXE1O00358 373 aaPredicted RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 DNAJA2O60884 412 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 SH3BGRLO75368 114 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 SORBS2O94875 1100 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 TFAP2AP05549 437 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 NCF2P19878 526 aaPredicted RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 CCR10P46092 362 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 NEK2P51955 445 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 EMP2P54851 167 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 PKNOX1P55347 436 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 RPS13P62277 151 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 TLR1Q15399 786 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 GRAMD1BQ3KR37 738 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 B3GNT6Q6ZMB0 384 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 PPP1R32Q7Z5V6 425 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 SREK1Q8WXA9 508 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 LZICQ8WZA0 190 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 CCDC124Q96CT7 223 aaKnown RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 PEX11GQ96HA9 241 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 FAM210AQ96ND0 272 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 QRFPRQ96P65 431 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 OR1F2PQ96R84 312 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 TBCDQ9BTW9 1192 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 ROGDIQ9GZN7 287 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 ELOVL6Q9H5J4 265 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 COPS7BQ9H9Q2 264 aaPredicted RBP18.49■□□□□ 0.55
LSM4-203ENST00000593829 KCNMB2Q9Y691 235 aa18.49■□□□□ 0.55
LSM4-203ENST00000593829 CCDC88CQ9P219 2028 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 PEX12O00623 359 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 TRIM13O60858 407 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 DNAJB6O75190 326 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 OR4F21O95013 312 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 HEXBP07686 556 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 ATP1A4Q13733 1029 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 ADRM1Q16186 407 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 SHISA5Q8N114 240 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 CPSF7Q8N684 471 aaKnown RBP18.48■□□□□ 0.55
LSM4-203ENST00000593829 MTFMTQ96DP5 389 aaKnown RBP18.48■□□□□ 0.55
LSM4-203ENST00000593829 SERINC2Q96SA4 455 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 NPLQ9BXD5 320 aaPredicted RBP18.48■□□□□ 0.55
LSM4-203ENST00000593829 RBM38Q9H0Z9 239 aaKnown RBP18.48■□□□□ 0.55
LSM4-203ENST00000593829 PRDM7Q9NQW5 492 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 MKL2Q9ULH7 1088 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 PPT2Q9UMR5 302 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 SNX6Q9UNH7 406 aa18.48■□□□□ 0.55
LSM4-203ENST00000593829 B3GALT2O43825 422 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 JRKO75564 520 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 TCHHL1Q5QJ38 904 aaPredicted RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 MFSD4BQ5TF39 518 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 UBE3DQ7Z6J8 389 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 CDYL2Q8N8U2 506 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 TBC1D20Q96BZ9 403 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 ARHGAP9Q9BRR9 750 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 SLC29A3Q9BZD2 475 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 P4HTMQ9NXG6 502 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 CNOT11Q9UKZ1 510 aaKnown RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 SAP18O00422 153 aaKnown RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 TNFAIP8O95379 198 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 ESRRBO95718 433 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 CLPTM1O96005 669 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 RNH1P13489 461 aaKnown RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 ETS2P15036 469 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 AP5B1Q2VPB7 878 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 LINC00303Q3SY05 128 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 MINDY4Q4G0A6 757 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 CA13Q8N1Q1 262 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 RP9Q8TA86 221 aaKnown RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 RGMAQ96B86 450 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 VPS50Q96JG6 964 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 UBL7Q96S82 380 aaPredicted RBP18.47■□□□□ 0.55
LSM4-203ENST00000593829 MID1IP1Q9NPA3 183 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 RIMS3Q9UJD0 308 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 HS3ST3B1Q9Y662 390 aa18.47■□□□□ 0.55
LSM4-203ENST00000593829 ARGFXA6NJG6 315 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 PSMD12O00232 456 aaPredicted RBP18.46■□□□□ 0.55
LSM4-203ENST00000593829 SOCS6O14544 535 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 PCDH17O14917 1159 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 KRT6AP02538 564 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 KRT6BP04259 564 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 FHP07954 510 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 CYC1P08574 325 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 JAK1P23458 1154 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 KRT6CP48668 564 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 ARFIP1P53367 373 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 RRADP55042 308 aa18.46■□□□□ 0.55
LSM4-203ENST00000593829 SGO1Q5FBB7 561 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms