RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 TEX10Q9NXF1 929 aaPredicted RBP20.15■□□□□ 0.82
R3HDM4-206ENST00000590454 MARCOQ9UEW3 520 aaPredicted RBP20.15■□□□□ 0.82
R3HDM4-206ENST00000590454 ADAM29Q9UKF5 820 aa20.15■□□□□ 0.82
R3HDM4-206ENST00000590454 CLDN16Q9Y5I7 305 aa20.15■□□□□ 0.82
R3HDM4-206ENST00000590454 ATP6AP2A0A1C7CYW4 349 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 ARGFXA6NJG6 315 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 SLC28A1O00337 649 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 PROM1O43490 865 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 DPM1O60762 260 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 ATP6AP2O75787 350 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 RSL1D1O76021 490 aaKnown RBP20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 KITP10721 976 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 IL10P22301 178 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 CPN2P22792 545 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 MMP11P24347 488 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 ACSM2AQ08AH3 577 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 CHAF1BQ13112 559 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 KIAA0040Q15053 153 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 ACSM2BQ68CK6 577 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 JMJD6Q6NYC1 403 aaPredicted RBP20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 KIRREL2Q6UWL6 708 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 MED25Q71SY5 747 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 PAGE2Q7Z2X7 111 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 CLNKQ7Z7G1 428 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 MRGPREQ86SM8 312 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 SEMA3GQ9NS98 782 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 CACNA1DQ01668 2161 aa20.14■□□□□ 0.81
R3HDM4-206ENST00000590454 IGHV3-20A0A0C4DH32 117 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 GLOD5A6NK44 160 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 LSM1O15116 133 aaKnown RBP20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 RGS14O43566 566 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 ALOX12BO75342 701 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 AIFM1O95831 613 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 PRPH2P23942 346 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 NR6A1Q15406 480 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 PRR30Q53SZ7 412 aaPredicted RBP20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 SPIN4Q56A73 249 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 HPS6Q86YV9 775 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 LRRC8CQ8TDW0 803 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 TM4SF18Q96CE8 201 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 PTCHD1Q96NR3 888 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 LRTM1Q9HBL6 345 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 LYARQ9NX58 379 aaKnown RBP20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 MAP10Q9P2G4 905 aa20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 POLR3HQ9Y535 204 aaPredicted RBP20.13■□□□□ 0.81
R3HDM4-206ENST00000590454 ESPL1Q14674 2120 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 NPIPB8E9PQR5 432 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 PCDH7O60245 1069 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 PRMT3O60678 531 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 SEC22BO75396 215 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 SNUPNO95149 360 aaKnown RBP20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 JAK1P23458 1154 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 TIA1P31483 386 aaKnown RBP eCLIP20.12■□□□□ 0.818e-8■□□□□ 10.5
R3HDM4-206ENST00000590454 MAPK12P53778 367 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 TNFRSF17Q02223 184 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 ID2Q02363 134 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 EEF1A2Q05639 463 aaKnown RBP20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 GALNTL6Q49A17 601 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 RFTN2Q52LD8 501 aaPredicted RBP20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 TMEM205Q6UW68 189 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 QSOX2Q6ZRP7 698 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 ANKRD37Q7Z713 158 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 RAB43Q86YS6 212 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 SCUBE1Q8IWY4 988 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 OR4N5Q8IXE1 308 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 PLPP5Q8NEB5 264 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 C19orf60Q96EN9 201 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 PRTFDC1Q9NRG1 225 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 C1orf109Q9NX04 203 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 SIRT5Q9NXA8 310 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 PHF11Q9UIL8 331 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 MCM8Q9UJA3 840 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 ERRFI1Q9UJM3 462 aaPredicted RBP20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 G3BP2Q9UN86 482 aaKnown RBP20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 DLGAP4Q9Y2H0 992 aa20.12■□□□□ 0.81
R3HDM4-206ENST00000590454 IGKV3D-11A0A0A0MRZ8 115 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 PGRMC2O15173 223 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 LDB3O75112 727 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 PEX11AO75192 247 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 LDLRP01130 860 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 C8orf89P0DMQ9 161 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 PPP2R1BP30154 601 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 NSDHLQ15738 373 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 NOXRED1Q6NXP6 359 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 GALNT18Q6P9A2 607 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 MAVSQ7Z434 540 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 WDR75Q8IWA0 830 aaKnown RBP20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 ZNF595Q8IYB9 648 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 Q8NA96 180 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 OR11G2Q8NGC1 345 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 ADAMTS18Q8TE60 1221 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 C16orf78Q8WTQ4 265 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 ANKRD9Q96BM1 317 aaPredicted RBP20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 MAGEB18Q96M61 343 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 NUF2Q9BZD4 464 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 PRDM9Q9NQV7 894 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 P4HTMQ9NXG6 502 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 LUZP4Q9P127 313 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 FBXL4Q9UKA2 621 aa20.11■□□□□ 0.81
R3HDM4-206ENST00000590454 TNRC6AQ8NDV7 1962 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms