RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 MYBPC3Q14896 1274 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 NR6A1Q15406 480 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 EXT1Q16394 746 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 ATG16L1Q676U5 607 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 OR52E8Q6IFG1 317 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 NOXRED1Q6NXP6 359 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 RIPOR1Q6ZS17 1223 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 MMP21Q8N119 569 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 DNAJB14Q8TBM8 379 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 C16orf78Q8WTQ4 265 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 ZNF75CPQ92670 426 aaPredicted RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 THOC3Q96J01 351 aaKnown RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 CCT7Q99832 543 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 FAIM2Q9BWQ8 316 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 LHPPQ9H008 270 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 PNO1Q9NRX1 252 aaKnown RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 PNPOQ9NVS9 261 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 GPR83Q9NYM4 423 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 RALYQ9UKM9 306 aaKnown RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 DLGAP4Q9Y2H0 992 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 POLR3HQ9Y535 204 aaPredicted RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
CALR-207ENST00000590325 SPTA1P02549 2419 aa13.4□□□□□ -0.26
CALR-207ENST00000590325 CFAP46Q8IYW2 2715 aa13.4□□□□□ -0.27
CALR-207ENST00000590325 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 K7EM74 188 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 MYO1DO94832 1006 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 IFNA16P05015 189 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 JUNP05412 331 aaKnown RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 SFTPCP11686 197 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 SLC26A5P58743 744 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 OCRLQ01968 901 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 TERF2Q15554 542 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 BTBD16Q32M84 506 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 RFTN2Q52LD8 501 aaPredicted RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 KIRREL3Q8IZU9 778 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 C7orf57Q8NEG2 295 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 NFAM1Q8NET5 270 aaPredicted RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.27
CALR-207ENST00000590325 M1APQ8TC57 530 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 PTPMT1Q8WUK0 201 aaPredicted RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 SEMA4CQ9C0C4 833 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 ZNF552Q9H707 407 aaPredicted RBP13.39□□□□□ -0.27
CALR-207ENST00000590325 ADAP2Q9NPF8 381 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 HEY2Q9UBP5 337 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 GIMAP2Q9UG22 337 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 CES1P1Q9UKY3 287 aa13.39□□□□□ -0.27
CALR-207ENST00000590325 ATP6AP2A0A1C7CYW4 349 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 C1orf226A1L170 272 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 ATP6AP2O75787 350 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 PDGFAP04085 211 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 IL3P08700 152 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 ITGAMP11215 1152 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 ALOX15P16050 662 aaPredicted RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 NR1D1P20393 614 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 GSTM5P46439 218 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 STT3AP46977 705 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 PGDP52209 483 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 AP2B1P63010 937 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 ZNF763Q0D2J5 394 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 BIKQ13323 160 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 PDCD2Q16342 344 aaPredicted RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 GALNTL6Q49A17 601 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 VWA5B1Q5TIE3 1220 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 TCTN3Q6NUS6 607 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 BRIX1Q8TDN6 353 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 PSMF1Q92530 271 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 PPP3R2Q96LZ3 170 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 SMAD5Q99717 465 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 SLC25A18Q9H1K4 315 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 ZNF71Q9NQZ8 489 aaPredicted RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 G3BP2Q9UN86 482 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 PPIEQ9UNP9 301 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 TP53TG5Q9Y2B4 290 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 WBP11Q9Y2W2 641 aaKnown RBP13.38□□□□□ -0.27
CALR-207ENST00000590325 TMED5Q9Y3A6 229 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 CLCA3PQ9Y6N3 262 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 MED13Q9UHV7 2174 aa13.38□□□□□ -0.27
CALR-207ENST00000590325 A0A1W2PS29 197 aa13.37□□□□□ -0.27
CALR-207ENST00000590325 C17orf105B2RV13 164 aa13.37□□□□□ -0.27
CALR-207ENST00000590325 KLHL41O60662 606 aa13.37□□□□□ -0.27
CALR-207ENST00000590325 PEX11AO75192 247 aa13.37□□□□□ -0.27
CALR-207ENST00000590325 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
CALR-207ENST00000590325 DRD2P14416 443 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms