RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 RAP1GDS1P52306 607 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 GPR85P60893 370 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 AP5B1Q2VPB7 878 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 METTL2BQ6P1Q9 378 aaKnown RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 ZNF793Q6ZN11 406 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 C16orf47Q6ZP98 133 aaPredicted RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 UBE3DQ7Z6J8 389 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 GPALPP1Q8IXQ4 340 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 ACOT4Q8N9L9 421 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 ACBD4Q8NC06 268 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 PTPMT1Q8WUK0 201 aaPredicted RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 REPS1Q96D71 796 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 OR51B5Q9H339 312 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 IPPKQ9H8X2 491 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 LIN28AQ9H9Z2 209 aaKnown RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 DMRT3Q9NQL9 472 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 PLSCR2Q9NRY7 297 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 DEPPQ9NTK1 212 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 KCMF1Q9P0J7 381 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 MYOTQ9UBF9 498 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 VTI1BQ9UEU0 232 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 PCDHGA11Q9Y5H2 935 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 CLCA3PQ9Y6N3 262 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 POLQO75417 2590 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 A8MVJ9 347 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 CDC40O60508 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN6-204ENST00000564752 SMIM24O75264 130 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 OR2J2O76002 312 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 SCELO95171 688 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 IFNA16P05015 189 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 TPOP07202 933 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 SNRPAP09012 282 aaKnown RBP17.16■□□□□ 0.34
CLN6-204ENST00000564752 SSTR2P30874 369 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 PIK3CBP42338 1070 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 RIPPLY3P57055 190 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 CD163Q86VB7 1156 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 RNF175Q8N4F7 328 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 MORN4Q8NDC4 146 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 PSD4Q8NDX1 1056 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 OR52N2Q8NGI0 321 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 CA5BP1Q8WTZ4 195 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 DAZLQ92904 295 aaKnown RBP17.16■□□□□ 0.34
CLN6-204ENST00000564752 SDCCAG3Q96C92 435 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 PHF21BQ96EK2 531 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 MTERF1Q99551 399 aaKnown RBP17.16■□□□□ 0.34
CLN6-204ENST00000564752 ENKD1Q9H0I2 346 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 HPF1Q9NWY4 346 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 ERVK-11Q9UQG0 969 aa17.16■□□□□ 0.34
CLN6-204ENST00000564752 CELSR1Q9NYQ6 3014 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 MYOCOSA0A1B0GUC4 107 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 H0YIV9 168 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 STX16-NPEPL1H3BU86 382 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 STX16O14662 325 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 RIPK2O43353 540 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 OR6B1O95007 311 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 STX4Q12846 297 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 CPSF6Q16630 551 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLN6-204ENST00000564752 DEPDC1Q5TB30 811 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 IL20RBQ6UXL0 311 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 HSDL2Q6YN16 418 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 MARVELD2Q8N4S9 558 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 ASB15Q8WXK1 588 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 ATP6V1E2Q96A05 226 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 RGMAQ96B86 450 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 MAPKAP1Q9BPZ7 522 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 MRPL46Q9H2W6 279 aaKnown RBP17.15■□□□□ 0.34
CLN6-204ENST00000564752 COQ3Q9NZJ6 369 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
CLN6-204ENST00000564752 CCDC168Q8NDH2 2452 aa17.14■□□□□ 0.34
CLN6-204ENST00000564752 WWP2O00308 870 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 PDE9AO76083 593 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 CPN2P22792 545 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 RPS13P62277 151 aaKnown RBP17.14■□□□□ 0.33
CLN6-204ENST00000564752 TMEM211Q6ICI0 200 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 OR4C11Q6IEV9 310 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 L3MBTL4Q8NA19 623 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 OR8K3Q8NH51 312 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 OR14A16Q8NHC5 309 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 MTBPQ96DY7 904 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 C14orf79Q96F83 325 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 RASL10BQ96S79 203 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 TREX2Q9BQ50 279 aaPredicted RBP17.14■□□□□ 0.33
CLN6-204ENST00000564752 MRPL57Q9BQC6 102 aaKnown RBP17.14■□□□□ 0.33
CLN6-204ENST00000564752 SORBS1Q9BX66 1292 aaKnown RBP17.14■□□□□ 0.33
CLN6-204ENST00000564752 DEFB127Q9H1M4 99 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 NOL11Q9H8H0 719 aaKnown RBP17.14■□□□□ 0.33
CLN6-204ENST00000564752 PCTPQ9UKL6 214 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 RNF11Q9Y3C5 154 aa17.14■□□□□ 0.33
CLN6-204ENST00000564752 CACNA1CQ13936 2221 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 PINLYPA6NC86 204 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 PLPP1O14494 284 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 LDB3O75112 727 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 CLDN9O95484 217 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 SOX3P41225 446 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 NR0B1P51843 470 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms