RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ABCG2Q9UNQ0 655 aa11.05□□□□□ -0.64
PCAT1-202ENST00000561978 OR1A2Q9Y585 309 aa11.05□□□□□ -0.64
PCAT1-202ENST00000561978 PCDHGB3Q9Y5G1 929 aa11.05□□□□□ -0.64
PCAT1-202ENST00000561978 ASCC3Q8N3C0 2202 aaKnown RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 TDRD6O60522 2096 aaKnown RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 C10orf142B7Z368 130 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 H0Y8X5 98 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 CAPN5O15484 640 aaPredicted RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 TNFRSF21O75509 655 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 JRKO75564 520 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 IL3P08700 152 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 JUNBP17275 347 aaPredicted RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 DDCP20711 480 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 UQCRC2P22695 453 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 CRHBPP24387 322 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 CD27P26842 260 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 SHMT2P34897 504 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MAPK12P53778 367 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 REEP5Q00765 189 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MC1RQ01726 317 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 TUBA3CQ13748 450 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 KEAP1Q14145 624 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 KRT33BQ14525 404 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 ZNF630Q2M218 657 aaPredicted RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 TRIM61Q5EBN2 209 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 VTCN1Q7Z7D3 282 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 SVIPQ8NHG7 77 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 C1orf216Q8TAB5 229 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 RGMAQ96B86 450 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 DTNBP1Q96EV8 351 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MAGED4Q96JG8 741 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 C12orf66Q96MD2 445 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 SLC6A18Q96N87 628 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 EPYCQ99645 322 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MENTQ9BUN1 341 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MS4A8Q9BY19 250 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 NLNQ9BYT8 704 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 PCED1AQ9H1Q7 454 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 MVB12BQ9H7P6 319 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 POLR1BQ9H9Y6 1135 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 CXorf21Q9HAI6 301 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 PARD6AQ9NPB6 346 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 ADAM29Q9UKF5 820 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 SLC17A4Q9Y2C5 497 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 SAMHD1Q9Y3Z3 626 aaKnown RBP11.04□□□□□ -0.64
PCAT1-202ENST00000561978 PCDHGA8Q9Y5G5 932 aa11.04□□□□□ -0.64
PCAT1-202ENST00000561978 WDFY3Q8IZQ1 3526 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 hCG_2039718K7EN88 272 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 BCKDKO14874 412 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 KLHL18O94889 574 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 C1QCP02747 245 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 C9P02748 559 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CFIP05156 583 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 ITGA2P17301 1181 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 GSTM2P28161 218 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 ELK4P28324 431 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CSNK1EP49674 416 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 RAB28P51157 221 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CCR5P51681 352 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 TRA2BP62995 288 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CTAG1AP78358 180 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 VLDLRP98155 873 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 PRDX1Q06830 199 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SCARB2Q14108 478 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 C16orf72Q14CZ0 275 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 KDM4DQ6B0I6 523 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SLC7A5P1Q8MH63 180 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 OR5P2Q8WZ92 322 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CIDECQ96AQ7 238 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 ZNF764Q96H86 408 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 APOL4Q9BPW4 351 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SLC6A16Q9GZN6 736 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 RUBCNLQ9H714 662 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 RXFP3Q9NSD7 469 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SEMA4GQ9NTN9 838 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 PDP1Q9P0J1 537 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 KIF17Q9P2E2 1029 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 PCDHGA5Q9Y5G8 931 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CFAP20Q9Y6A4 193 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 GOLGA4Q13439 2230 aaKnown RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 H7BY64 318 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CACNB4O00305 520 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 PLPP1O14494 284 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 ADAMDEC1O15204 470 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CLEC3AO75596 197 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 DNAJB5O75953 348 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 CPNE6O95741 557 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 ACP5P13686 325 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 SLC5A2P31639 672 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 BSGP35613 385 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 GRK3P35626 688 aa11.03□□□□□ -0.64
PCAT1-202ENST00000561978 MVDP53602 400 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms