RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SCGB3A2Q96PL1 93 aa12.91□□□□□ -0.34
TRAF3-208ENST00000560371 H0YJX3 145 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 PROM1O43490 865 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 BCAS2O75934 225 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 PORP16435 677 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 SLC9A3P48764 834 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ARPC4P59998 168 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 DOC2AQ14183 400 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 RABL3Q5HYI8 236 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 MANEALQ5VSG8 457 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 NPWQ8N729 165 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 DIO2Q92813 273 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 HLA-CQ95604 372 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 SPTA1P02549 2419 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 CLDN25C9JDP6 229 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 FADDQ13158 208 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 CBLBQ13191 982 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF234Q14588 700 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 RHCGQ9UBD6 479 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 GPR37L1O60883 481 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ADORA3P0DMS8 318 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 OR56A3Q8NH54 315 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 HPS1Q92902 700 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 PCP4L1A6NKN8 68 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 BHMG1C9JSJ3 638 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 PPM1BO75688 479 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 CD1DP15813 335 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 FPR1P21462 350 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ENTPD1P49961 510 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ARSFP54793 590 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 DSC1Q08554 894 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 RTL10Q7L3V2 364 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 GNPDA2Q8TDQ7 276 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 IL1RNP18510 177 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 SPATS1Q496A3 300 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 PM20D1Q6GTS8 502 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 OR52E8Q6IFG1 317 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 CRTC1Q6UUV9 634 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 RAB11FIP2Q7L804 512 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 CARM1Q86X55 608 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 TREML1Q86YW5 311 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 KLHDC8AQ8IYD2 350 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 NSUN5Q96P11 429 aaKnown RBP12.9□□□□□ -0.34
TRAF3-208ENST00000560371 MGAT4BQ9UQ53 548 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 HCFC2Q9Y5Z7 792 aa12.9□□□□□ -0.34
TRAF3-208ENST00000560371 MLLT1Q03111 559 aaPredicted RBP12.9□□□□□ -0.35
TRAF3-208ENST00000560371 ACY1Q03154 408 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 LYSMD4Q5XG99 296 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 NLGN4XQ8N0W4 816 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 TCEANCQ8N8B7 351 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 ADAMTS18Q8TE60 1221 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 CCDC107Q8WV48 283 aa12.9□□□□□ -0.35
TRAF3-208ENST00000560371 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PRAMEF33A0A0G2JMD5 474 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 L7N2F9 121 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 SPARCP09486 303 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 VAMP2P63027 116 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PPP1R3AQ16821 1122 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 UNC5DQ6UXZ4 953 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 FTMTQ8N4E7 242 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PRR11Q96HE9 360 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 MARCH4Q9P2E8 410 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 DRD2P14416 443 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 GPR143P51810 404 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 TYSND1Q2T9J0 566 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 THRSPQ92748 146 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 SLC33A1O00400 549 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 TOR1BO14657 336 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 S1PR1P21453 382 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 TNFRSF4P43489 277 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 DIO3P55073 304 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 NANOGP8Q6NSW7 305 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 OR8K5Q8NH50 307 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 SHKBP1Q8TBC3 707 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 NANOGQ9H9S0 305 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PSKH1P11801 424 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ZNF782Q6ZMW2 699 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 AURKBQ96GD4 344 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-208ENST00000560371 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 ITGB7P26010 798 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 C6orf120Q7Z4R8 191 aa12.89□□□□□ -0.35
TRAF3-208ENST00000560371 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms