RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 MTO1Q9Y2Z2 717 aaKnown RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 FAM221AA4D161 298 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 PHGDHO43175 533 aaKnown RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 ZSCAN12O43309 604 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 NADKO95544 446 aaPredicted RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 COX7A2P14406 83 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 TNNI3P19429 210 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ADH7P40394 386 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 MSH2P43246 934 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 STT3AP46977 705 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ATP6V0D1P61421 351 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ID2Q02363 134 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 IRF8Q02556 426 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 TBL3Q12788 808 aaKnown RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 ASPHQ12797 758 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 CHIT1Q13231 466 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 SLC10A1Q14973 349 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ZNF791Q3KP31 576 aaPredicted RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 PIGGQ5H8A4 983 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 LRRC70Q7Z2Q7 622 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 LIX1LQ8IVB5 337 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 C9orf40Q8IXQ3 194 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 KLHL7Q8IXQ5 586 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 BBOF1Q8ND07 529 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 PAQR8Q8TEZ7 354 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 NRGNQ92686 78 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 NINJ1Q92982 152 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 ESAMQ96AP7 390 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 FBXL20Q96IG2 436 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 UBXN10Q96LJ8 280 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 RBBP8Q99708 897 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 SEMA4BQ9NPR2 832 aaPredicted RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 CD274Q9NZQ7 290 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 SPRR3Q9UBC9 169 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 B4GALT7Q9UBV7 327 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.08□□□□□ -0.48
TPM1-220ENST00000559556 PRR14LQ5THK1 2151 aa12.08□□□□□ -0.48
TPM1-220ENST00000559556 RTTNQ86VV8 2226 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 ATP6AP2A0A1C7CYW4 349 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CXorf49A8MYA2 514 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 FAM47E-STBD1D6RA91 191 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 RTCAO00442 366 aaKnown RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 FGF17O60258 216 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CTAG2O75638 210 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 ATP6AP2O75787 350 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 PIAS1O75925 651 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 GABRA1P14867 456 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 STMN1P16949 149 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SERPINB1P30740 379 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SSR2P43308 183 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 RPL21P46778 160 aaKnown RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 IST1P53990 364 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 FOLH1Q04609 750 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 PCDH1Q08174 1060 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 BIKQ13323 160 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 ZKSCAN8Q15776 578 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 HIST2H2ACQ16777 129 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 RIPPLY2Q5TAB7 128 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SLC22A10Q63ZE4 541 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 HIST2H2AA3Q6FI13 130 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CREG2Q8IUH2 290 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 DND1Q8IYX4 353 aaKnown RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 ZBED8Q8IZ13 594 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 FBXW8Q8N3Y1 598 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SLC15A4Q8N697 577 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 UBE2E3Q969T4 207 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SPACA9Q96E40 222 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 SENP5Q96HI0 755 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 ART5Q96L15 291 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 DGAT2Q96PD7 388 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CPNE1Q99829 537 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 FOXC2Q99958 501 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CNPPD1Q9BV87 410 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 CD244Q9BZW8 370 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 TRIM31Q9BZY9 425 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 PHACTR1Q9C0D0 580 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 GRPEL1Q9HAV7 217 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 QPCTLQ9NXS2 382 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 ACAD8Q9UKU7 415 aa12.07□□□□□ -0.48
TPM1-220ENST00000559556 BOKQ9UMX3 212 aaPredicted RBP12.07□□□□□ -0.48
TPM1-220ENST00000559556 LRRC3CA6NJW4 275 aa12.06□□□□□ -0.48
TPM1-220ENST00000559556 EFCAB8A8MWE9 144 aa12.06□□□□□ -0.48
TPM1-220ENST00000559556 CCDC188H7C350 402 aa12.06□□□□□ -0.48
TPM1-220ENST00000559556 CCNT2O60583 730 aaKnown RBP12.06□□□□□ -0.48
TPM1-220ENST00000559556 S100BP04271 92 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms