RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CCDC86Q9H6F5 360 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 IL17BQ9UHF5 180 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 SYNDIG1LA6NDD5 238 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 GABRR3A8MPY1 467 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 SCAMP2O15127 329 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 EFSO43281 561 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 FGF17O60258 216 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 SCN2BO60939 215 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 LIFP15018 202 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 WT1P19544 449 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 PRPS1L1P21108 318 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 IL12AP29459 219 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 DLSTP36957 453 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 BTG2P78543 158 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 BIKQ13323 160 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 MLIPQ5VWP3 458 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 PROSER1Q86XN7 944 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 FUNDC1Q8IVP5 155 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 TMEM132CQ8N3T6 1108 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 C7orf57Q8NEG2 295 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 ELAC2Q9BQ52 826 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 NSRP1Q9H0G5 558 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 CLMPQ9H6B4 373 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 REEP4Q9H6H4 257 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 NECTIN3Q9NQS3 549 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 SEMA3GQ9NS98 782 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 PPIEQ9UNP9 301 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 LHX6Q9UPM6 363 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 MAPRE3Q9UPY8 281 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 COPG1Q9Y678 874 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 SPACA6W5XKT8 324 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 SCN2AQ99250 2005 aa13.9□□□□□ -0.18
SNRPA1-207ENST00000559309 OR2W5A6NFC9 320 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 E9PBE3 544 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 KLHL41O60662 606 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 GPR75O95800 540 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 MMP11P24347 488 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 GALNSP34059 522 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 C2orf80Q0P641 193 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 SSPNQ14714 243 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 ZNF385BQ569K4 471 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 KRTCAP2Q8N6L1 136 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 CLHC1Q8NHS4 586 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 SUN3Q8TAQ9 357 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 NUDT8Q8WV74 236 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 CNRIP1Q96F85 164 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 WDR77Q9BQA1 342 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 MESP1Q9BRJ9 268 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 FAIM2Q9BWQ8 316 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 RBCK1Q9BYM8 510 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 MYLK2Q9H1R3 596 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 SOX17Q9H6I2 414 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 PRTFDC1Q9NRG1 225 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 GPN3Q9UHW5 284 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 HS3ST3B1Q9Y662 390 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 IGSF10Q6WRI0 2623 aa13.89□□□□□ -0.19
SNRPA1-207ENST00000559309 A0A1W2PS29 197 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PSMD12O00232 456 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 CLDN4O14493 209 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 SOCS6O14544 535 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 B4GALT2O60909 372 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 ALOX12BO75342 701 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 CREG1O75629 220 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 IGHEP01854 428 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 IFI6P09912 130 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 MAOAP21397 527 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PPP2R1BP30154 601 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 RPL3P39023 403 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 WNT3P56703 355 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 UFM1P61960 85 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 RPS18P62269 152 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 RPS15P62841 145 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PHC1P78364 1004 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 FOLH1Q04609 750 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 DUSP2Q05923 314 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 MGAT2Q10469 447 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 SRSF6Q13247 344 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 IL10RAQ13651 578 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 MLC1Q15049 377 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 TERF2Q15554 542 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 FAM69BQ5VUD6 431 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PPP1R32Q7Z5V6 425 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 CPLX4Q7Z7G2 160 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 TICAM1Q8IUC6 712 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 IL22RA1Q8N6P7 574 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 GLB1L3Q8NCI6 653 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 PSMA8Q8TAA3 256 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 KCNE4Q8WWG9 221 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 TSLPQ969D9 159 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 EFHD1Q9BUP0 239 aa13.88□□□□□ -0.19
SNRPA1-207ENST00000559309 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms