RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 BTG2P78543 158 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 MGAT5Q09328 741 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 MORF4L2Q15014 288 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 HERC3Q15034 1050 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 OR1C1Q15619 314 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TSNQ15631 228 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 ACER2Q5QJU3 275 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TEDDM1Q5T9Z0 273 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 MYO7BQ6PIF6 2116 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TMEM207Q6UWW9 146 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 MILR1Q7Z6M3 343 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CTAGE6Q86UF2 777 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 THOC6Q86W42 341 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 LURAP1LQ8IV03 231 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CNTN4Q8IWV2 1026 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 SRRM1Q8IYB3 904 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 ZBED8Q8IZ13 594 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 KIF2BQ8N4N8 673 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 THAP3Q8WTV1 239 aaPredicted RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 SLC5A11Q8WWX8 675 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 ATL1Q8WXF7 558 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 HAS2Q92819 552 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TBC1D20Q96BZ9 403 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 FBXL8Q96CD0 374 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 IMMP1LQ96LU5 166 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 SIGLEC12Q96PQ1 595 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 KRT12Q99456 494 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 LPAR4Q99677 370 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 BARD1Q99728 777 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 NAPGQ99747 312 aaPredicted RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 SLX1AQ9BQ83 275 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 UTP23Q9BRU9 249 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 CAB39LQ9H9S4 337 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 PLAC1Q9HBJ0 212 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 SEC14L3Q9UDX4 400 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 NPIPA1Q9UND3 350 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 SLC22A14Q9Y267 594 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TMA7Q9Y2S6 64 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 SNX24Q9Y343 169 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CPAMD8Q8IZJ3 1885 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 A0A1B0GUH1 482 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 MAGEB17A8MXT2 336 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CES2O00748 559 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 NDC80O14777 642 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 PCDH17O14917 1159 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 GALR3O60755 368 aaPredicted RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 SH3BGRLO75368 114 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 WISP2O76076 250 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SEC31AO94979 1220 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 FHP07954 510 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ZNF37AP17032 561 aaPredicted RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 CD247P20963 164 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 JAK1P23458 1154 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 IVDP26440 423 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 EEF1DP29692 281 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 AGTR2P50052 363 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CASP6P55212 293 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SLC26A5P58743 744 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 TAS2R39P59534 338 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SKP1P63208 163 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 BTN3A2P78410 334 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 REEP5Q00765 189 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 RHAGQ02094 409 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ALDH6A1Q02252 535 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 RELAQ04206 551 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 USP10Q14694 798 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 ZRSR2Q15696 482 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 EXT1Q16394 746 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 MAPKAPK3Q16644 382 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 MEP1AQ16819 746 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 PLAG1Q6DJT9 500 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SPINK14Q6IE38 97 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SBSNQ6UWP8 590 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ABHD13Q7L211 337 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CLNKQ7Z7G1 428 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ZC3HC1Q86WB0 502 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 CCDC25Q86WR0 208 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CEP97Q8IW35 865 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SLC5A8Q8N695 610 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SNX31Q8N9S9 440 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ABHD11Q8NFV4 315 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 OR56A3Q8NH54 315 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ANKRD49Q8WVL7 239 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ANP32BQ92688 251 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 SLCO2A1Q92959 643 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 TM4SF19Q96DZ7 209 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 MAGED4Q96JG8 741 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ZNF354BQ96LW1 612 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 TM9SF2Q99805 663 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 AIF1LQ9BQI0 150 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 KLHL31Q9H511 634 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CDCP1Q9H5V8 836 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 SAYSD1Q9NPB0 183 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 PNO1Q9NRX1 252 aaKnown RBP6.86□□□□□ -1.31
SPG11-213ENST00000558988 LANCL2Q9NS86 450 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 WWOXQ9NZC7 414 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 TXNDC16Q9P2K2 825 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 COPG2Q9UBF2 871 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 CTNNAL1Q9UBT7 734 aa6.86□□□□□ -1.31
SPG11-213ENST00000558988 ZFP69BQ9UJL9 534 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms