RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF611Q8N823 705 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 MORN4Q8NDC4 146 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 PPHLN1Q8NEY8 458 aaKnown RBP10.78□□□□□ -0.68
SMAD3-206ENST00000558739 OR4K1Q8NGD4 311 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF721Q8TF20 911 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 STARD4Q96DR4 205 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 TSNARE1Q96NA8 513 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 SGPP1Q9BX95 441 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 SHARPINQ9H0F6 387 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 ZFP69BQ9UJL9 534 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 C15orf41Q9Y2V0 281 aa10.78□□□□□ -0.68
SMAD3-206ENST00000558739 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-206ENST00000558739 E5RI56 91 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 H0Y3Z8 333 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 MSTNO14793 375 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ESR1P03372 595 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 DPP4P27487 766 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 THBS2P35442 1172 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 IDUAP35475 653 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 DIO3P55073 304 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.69
SMAD3-206ENST00000558739 TOMM20Q15388 145 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 LCTLQ6UWM7 567 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.77□□□□□ -0.69
SMAD3-206ENST00000558739 CPNE9Q8IYJ1 553 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 CNEP1R1Q8N9A8 125 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 OR8K3Q8NH51 312 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 OR14A16Q8NHC5 309 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ZPLD1Q8TCW7 415 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ATL1Q8WXF7 558 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 AKAP1Q92667 903 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMAD3-206ENST00000558739 DAZLQ92904 295 aaKnown RBP10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ART5Q96L15 291 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 RILPQ96NA2 401 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 PCBD2Q9H0N5 130 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 ETNK1Q9HBU6 452 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 IFNKQ9P0W0 207 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 HEY2Q9UBP5 337 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 PDE10AQ9Y233 779 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 PCDHA13Q9Y5I0 950 aa10.77□□□□□ -0.69
SMAD3-206ENST00000558739 LRRC14BA6NHZ5 514 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 CYR61O00622 381 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 ZBTB14O43829 449 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 AKR1B10O60218 316 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 LDB3O75112 727 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 VAPBO95292 243 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 GAS8O95995 478 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 THBS1P07996 1170 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 FBXO45P0C2W1 286 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 POU2F1P14859 743 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SAT1P21673 171 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 CERS1P27544 350 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 HNRNPH1P31943 449 aaKnown RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 RPL22P35268 128 aaKnown RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 RAB38P57729 211 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SESN2P58004 480 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SIRPAP78324 504 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 CTBP1Q13363 440 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SF3B4Q15427 424 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 ETFDHQ16134 617 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 PHKG1Q16816 387 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 NIPAL1Q6NVV3 410 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 DGAT2L6Q6ZPD8 337 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SH2D5Q6ZV89 423 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 CENPUQ71F23 418 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 STRA8Q7Z7C7 330 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 FAM83FQ8NEG4 500 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 OR5L2Q8NGL0 311 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 LILRB1Q8NHL6 650 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 GABPB2Q8TAK5 448 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 RAB3IL1Q8TBN0 382 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 DIO2Q92813 273 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 NEUROG1Q92886 237 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 PEX13Q92968 403 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 WNT2BQ93097 391 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 NEIL2Q969S2 332 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 MFSD3Q96ES6 412 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 ZFP3Q96NJ6 502 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 GAL3ST4Q96RP7 486 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 CHP1Q99653 195 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 TM9SF2Q99805 663 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 TMEM204Q9BSN7 226 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 ALOXE3Q9BYJ1 711 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 ESRP2Q9H6T0 727 aaKnown RBP10.76□□□□□ -0.69
SMAD3-206ENST00000558739 TMEM160Q9NX00 188 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 VTI1BQ9UEU0 232 aa10.76□□□□□ -0.69
SMAD3-206ENST00000558739 SLC35F4A4IF30 521 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 H3BMM5 538 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 PTPN7P35236 360 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 FBXW4P57775 412 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 REEP5Q00765 189 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 FAPQ12884 760 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 KCTD19Q17RG1 926 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-206ENST00000558739 ZNF549Q6P9A3 640 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 ZNF595Q8IYB9 648 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 NUBPLQ8TB37 319 aa10.75□□□□□ -0.69
SMAD3-206ENST00000558739 CD200R1Q8TD46 325 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms