RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NOL11Q9H8H0 719 aaKnown RBP9.77□□□□□ -0.85
TPM1-212ENST00000558347 ETAA1Q9NY74 926 aa9.77□□□□□ -0.85
TPM1-212ENST00000558347 SPATA7Q9P0W8 599 aa9.77□□□□□ -0.85
TPM1-212ENST00000558347 DHCR7Q9UBM7 475 aaKnown RBP9.77□□□□□ -0.85
TPM1-212ENST00000558347 PCDHGB4Q9UN71 923 aa9.77□□□□□ -0.85
TPM1-212ENST00000558347 PCDHGB5Q9Y5G0 923 aa9.77□□□□□ -0.85
TPM1-212ENST00000558347 A0A087WXM4 84 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 TRIM64A6NGJ6 449 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ARGFXA6NJG6 315 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 OR7A17O14581 309 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ARPC2O15144 300 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ZSCAN9O15535 394 aaPredicted RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 TIPRLO75663 272 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SLC22A3O75751 556 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 RASAL1O95294 804 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SLC16A8O95907 504 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 OTCP00480 354 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 PDGFAP04085 211 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 HBQ1P09105 142 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 LINC00032P0C843 101 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ETS2P15036 469 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ATP6V1B1P15313 513 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 EPB42P16452 691 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 GCGRP47871 477 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 CDK9P50750 372 aaKnown RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 YBX1P67809 324 aaKnown RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 NFYCQ13952 458 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 GK3PQ14409 553 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SLC9A5Q14940 896 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 NCF4Q15080 339 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SMU1Q2TAY7 513 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 FBXO48Q5FWF7 155 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 FIGLAQ6QHK4 219 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 AMIGO2Q86SJ2 522 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 DPP10Q8N608 796 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 TRIML2Q8N7C3 387 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ADAMTS16Q8TE57 1224 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 ZNF480Q8WV37 535 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 THAP4Q8WY91 577 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 GFM2Q969S9 779 aaKnown RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 SLC22A18Q96BI1 424 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 NMD3Q96D46 503 aaKnown RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 DPH2Q9BQC3 489 aaPredicted RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 RAB11FIP5Q9BXF6 653 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 IPPKQ9H8X2 491 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SEMA4BQ9NPR2 832 aaPredicted RBP9.76□□□□□ -0.85
TPM1-212ENST00000558347 OLAHQ9NV23 265 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 DNAJC11Q9NVH1 559 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 PLCL2Q9UPR0 1127 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 CEPT1Q9Y6K0 416 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 AP1M2Q9Y6Q5 423 aa9.76□□□□□ -0.85
TPM1-212ENST00000558347 SEC16AO15027 2179 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 TNRC6AQ8NDV7 1962 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 CCDC88CQ9P219 2028 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 A0A1W2PPV9 198 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 TCRBV5S2A0A599 114 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 CCDC154A6NI56 674 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 MKRN2OSH3BPM6 223 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 PPP6CO00743 305 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 SOCS2O14508 198 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 CNOT3O75175 753 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 CDH2P19022 906 aaPredicted RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 EPORP19235 508 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 AGXTP21549 392 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 GDF5P43026 501 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ZFP36L2P47974 494 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 GSK3BP49841 420 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 POLR2JP52435 117 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 PNLIPRP1P54315 467 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 FOXL2P58012 376 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 TLE1Q04724 770 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 EMX2Q04743 252 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 TRAF3Q13114 568 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 NAE1Q13564 534 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 SF1Q15637 639 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 RBBP7Q16576 425 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 CYP2A13Q16696 494 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 TCTN3Q6NUS6 607 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ERI1Q8IV48 349 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 TMEM151BQ8IW70 566 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 LRRC56Q8IYG6 542 aaPredicted RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 OR2A1Q8NGT9 310 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 MAGEB10Q96LZ2 347 aaPredicted RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 KCNA7Q96RP8 456 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 KCTD14Q9BQ13 255 aaPredicted RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 SLC39A3Q9BRY0 314 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 SGPP1Q9BX95 441 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ALG2Q9H553 416 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 IRAK4Q9NWZ3 460 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 GPRC5BQ9NZH0 403 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 RSL24D1Q9UHA3 163 aaKnown RBP9.75□□□□□ -0.85
TPM1-212ENST00000558347 TRPS1Q9UHF7 1281 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ANAPC2Q9UJX6 822 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ZNF225Q9UK10 706 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 AP3M1Q9Y2T2 418 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ANGPTL3Q9Y5C1 460 aa9.75□□□□□ -0.85
TPM1-212ENST00000558347 ASH1LQ9NR48 2969 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms