RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ACOXLQ9NUZ1 547 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 PLEKHB1Q9UF11 243 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 HCN2Q9UL51 889 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 KIAA1671Q9BY89 1806 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 SAP18O00422 153 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 PDE9AO76083 593 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 POP4O95707 220 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 CSF2P04141 144 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 FHP07954 510 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 CLEC2LP0C7M8 214 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 CPEP16870 476 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 ERP29P30040 261 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 MAPK9P45984 424 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 PREPP48147 710 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 POLR2LP62875 67 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 SEC23BQ15437 767 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 LCN1P1Q5VSP4 162 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 SAXO2Q658L1 398 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TRIM48Q8IWZ4 208 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TCTE3Q8IZS6 198 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 APOBEC4Q8WW27 367 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 AP3S1Q92572 193 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 PDXPQ96GD0 296 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 EFCAB11Q9BUY7 163 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 DMRT3Q9NQL9 472 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 DKK3Q9UBP4 350 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 DIMT1Q9UNQ2 313 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 DYRK1BQ9Y463 629 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 OR6C70A6NIJ9 312 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 HEPACAM2A8MVW5 462 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 ARHGEF9O43307 516 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TSPAN6O43657 245 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 RAB36O95755 333 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TGFB1P01137 390 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 H1F0P07305 194 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 MSL3P1P0C860 447 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 CPN2P22792 545 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 GPC1P35052 558 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 KIR2DL3P43628 341 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 DGKGP49619 791 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 CRHR2Q13324 411 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 Q5BKY6 102 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TPGS2Q68CL5 300 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 HIST2H2AA3Q6FI13 130 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 CEACAM20Q6UY09 585 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 DPY19L3Q6ZPD9 716 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 MED18Q9BUE0 208 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 OR51B5Q9H339 312 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 ANKRA2Q9H9E1 313 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 KLHL21Q9UJP4 597 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 A0A0B4J293 547 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 NPC1O15118 1278 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 PLA2G10O15496 165 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TRIM3O75382 744 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF30P17039 623 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 IRS1P35568 1242 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 IL12RB1P42701 662 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 SMIM11AP58511 58 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TSTA3Q13630 321 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 RPS26P11Q5JNZ5 115 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 BCDIN3DQ7Z5W3 292 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 DDX53Q86TM3 631 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 CPXM2Q8N436 756 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 RNF31Q96EP0 1072 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 SYT17Q9BSW7 474 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 IRF2BPLQ9H1B7 796 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 MIEF1Q9NQG6 463 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 TVP23BQ9NYZ1 205 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 HS3ST2Q9Y278 367 aa11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 SPIN1Q9Y657 262 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-211ENST00000557658 PRRG1O14668 218 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ATG13O75143 517 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 OLFM2O95897 454 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 BCHEP06276 602 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 KLK1P06870 262 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 IL3P08700 152 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 C1GALT1C1LP0DN25 315 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 CYP2A6P11509 494 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SELPP16109 830 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 SDC2P34741 201 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TBPL1P62380 186 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 HOXC5Q00444 222 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TARDBPQ13148 414 aaKnown RBP eCLIP11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 PRSS53Q2L4Q9 553 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 ATAT1Q5SQI0 421 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 IER5LQ5T953 404 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TIGD3Q6B0B8 471 aa11.23□□□□□ -0.61
VIPAS39-211ENST00000557658 TCTN3Q6NUS6 607 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms