RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SHFQ7M4L6 423 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 PDZD3Q86UT5 571 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 TP53INP1Q96A56 240 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 PIP5K1AQ99755 562 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 NMNAT1Q9HAN9 279 aaPredicted RBP14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 ZNF639Q9UID6 485 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 SLC6A14Q9UN76 642 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 GPR52Q9Y2T5 361 aa14.59□□□□□ -0.07
TMEM55B-207ENST00000557041 CPSF4LA6NMK7 179 aaKnown RBP14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 VEGFDO43915 354 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 GASTP01350 101 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 CISD3P0C7P0 127 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 GTF2E2P29084 291 aaKnown RBP14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 PCGF2P35227 344 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 ZNF846Q147U1 533 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 IRF4Q15306 451 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 TOR1AIP1Q5JTV8 583 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 SMARCD3Q6STE5 483 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 SYNPOQ8N3V7 929 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 TUBA1CQ9BQE3 449 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 RBCK1Q9BYM8 510 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 ACOT13Q9NPJ3 140 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 SAGE1Q9NXZ1 904 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 ERGIC3Q9Y282 383 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 SLC9A8Q9Y2E8 581 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 POFUT2Q9Y2G5 429 aa14.58□□□□□ -0.07
TMEM55B-207ENST00000557041 MYL12BO14950 172 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 H1F0P07305 194 aaKnown RBP14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 RPS7P62081 194 aaKnown RBP14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 DEFB134Q4QY38 66 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 CRB2Q5IJ48 1285 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 ATAD3BQ5T9A4 648 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 IRAK1BP1Q5VVH5 260 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 PARGQ86W56 976 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 AMER2Q8N7J2 671 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 ANKRD53Q8N9V6 530 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF675Q8TD23 568 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 KLHL31Q9H511 634 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 EHD3Q9NZN3 535 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 ASGR2P07307 311 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 CERS1P27544 350 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 TPP2P29144 1249 aaPredicted RBP14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 XKP51811 444 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 DBPQ10586 325 aaPredicted RBP14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 TUBA3CQ13748 450 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 IQCCQ4KMZ1 466 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 IQCHQ86VS3 1027 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 KLHDC8AQ8IYD2 350 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 METTL4Q8N3J2 472 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 CAMKK1Q8N5S9 505 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 C7orf57Q8NEG2 295 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 MKLN1Q9UL63 735 aa14.58□□□□□ -0.08
TMEM55B-207ENST00000557041 UQCRC2P22695 453 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 MAP4K2Q12851 820 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 ADAMTS15Q8TE58 950 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 SIPA1Q96FS4 1042 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 ENPP5Q9UJA9 477 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF780BQ9Y6R6 833 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 NOTCH4Q99466 2003 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 LRRC72A6NJI9 287 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GNB5O14775 395 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 NPC1O15118 1278 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 JRKO75564 520 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 HOXB2P14652 356 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 POLR2CP19387 275 aaPredicted RBP14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GZMMP51124 257 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 RUNX1T1Q06455 604 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GPR68Q15743 365 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GPR19Q15760 415 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 MICAQ29983 383 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 PROX2Q3B8N5 592 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF554Q86TJ5 538 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 HERVK_113Q902F9 699 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 MKRN2Q9H000 416 aaKnown RBP14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 SRMSQ9H3Y6 488 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 SNTG1Q9NSN8 517 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 PCDHGA6Q9Y5G7 932 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 STK25O00506 426 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 PGRMC2O15173 223 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 SLC16A6O15403 523 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 RYKP34925 604 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GSTM5P46439 218 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 MRPL19P49406 292 aaKnown RBP14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 SIM1P81133 766 aaPredicted RBP14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 C18orf63Q68DL7 685 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 LAIR1Q6GTX8 287 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 FAM71E1Q6IPT2 247 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 ZNF730Q6ZMV8 503 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GATAD2AQ86YP4 633 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 DEFB119Q8N690 84 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 HPS1Q92902 700 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 MUL1Q969V5 352 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 CAMK1GQ96NX5 476 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 DPEP2Q9H4A9 486 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GPATCH2Q9NW75 528 aa14.57□□□□□ -0.08
TMEM55B-207ENST00000557041 GIN1Q9NXP7 522 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms