RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 MYOCOSA0A1B0GUC4 107 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 SH3D21A4FU49 640 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 ETHE1O95571 254 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 C1QAP02745 245 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 BMP7P18075 431 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 GDF1P27539 372 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 HPDP32754 393 aaPredicted RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 KCNJ1P48048 391 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 AGFG1P52594 562 aaKnown RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 TERF1P54274 439 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 MTTPP55157 894 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 ADPRMQ3LIE5 342 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 ANKRD22Q5VYY1 191 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 TRIM40Q6P9F5 258 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 MCUQ8NE86 351 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 OR2L5Q8NG80 312 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 JSRP1Q96MG2 331 aaPredicted RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 RUNDC3BQ96NL0 473 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 RBM24Q9BX46 236 aaKnown RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 EIF3LQ9Y262 564 aaKnown RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
C12orf49-204ENST00000548356 IKBKGQ9Y6K9 419 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 NBEAL1Q6ZS30 2694 aa13.39□□□□□ -0.27
C12orf49-204ENST00000548356 TRIM64A6NGJ6 449 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 TRIM64BA6NI03 449 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 CASKO14936 926 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 H2AFYO75367 372 aaKnown RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 ERN1O75460 977 aaKnown RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 CLEC3AO75596 197 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 CERS1P27544 350 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 PLA2G16P53816 162 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 NHSL2Q5HYW2 709 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 ABHD17CQ6PCB6 329 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 SBSNQ6UWP8 590 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 SYDE1Q6ZW31 735 aaPredicted RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 C9orf40Q8IXQ3 194 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 MAIP1Q8WWC4 291 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 CCT6BQ92526 530 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 SERPINB12Q96P63 405 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 TRIB1Q96RU8 372 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 DOHHQ9BU89 302 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 REXO4Q9GZR2 422 aaKnown RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 TSPY26PQ9H489 355 aa13.38□□□□□ -0.27
C12orf49-204ENST00000548356 COPS7BQ9H9Q2 264 aaPredicted RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 CNOT11Q9UKZ1 510 aaKnown RBP13.38□□□□□ -0.27
C12orf49-204ENST00000548356 ANKRD33BA6NCL7 494 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 LDB3O75112 727 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 TRIM3O75382 744 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 CRLF1O75462 422 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 TBX6O95947 436 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 IGKV3-11P04433 115 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 HPNP05981 417 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 C1GALT1C1LP0DN25 315 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 COX7A2P14406 83 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 GNAZP19086 355 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 GABRB3P28472 473 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 SERPINB3P29508 390 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 MAGEA3P43357 314 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 GPS1Q13098 491 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 TRIP13Q15645 432 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 KCTD19Q17RG1 926 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 TBCELQ5QJ74 424 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 SLCO4C1Q6ZQN7 724 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 FAM13CQ8NE31 585 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 OR10G3Q8NGC4 313 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 ZNF597Q96LX8 424 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 PITHD1Q9GZP4 211 aaPredicted RBP13.37□□□□□ -0.27
C12orf49-204ENST00000548356 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 LYRM4Q9HD34 91 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 HOMER3Q9NSC5 361 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 CAMK2AQ9UQM7 478 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 KIAA1549Q9HCM3 1950 aa13.37□□□□□ -0.27
C12orf49-204ENST00000548356 CCDC175P0C221 793 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 TMIGD3P0DMS9 266 aaPredicted RBP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 FPR1P21462 350 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 VPS41P49754 854 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 SLBPQ14493 270 aaKnown RBP eCLIP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 KRT78Q8N1N4 520 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 WDYHV1Q96HA8 205 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 PDLIM5Q96HC4 596 aaKnown RBP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
C12orf49-204ENST00000548356 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
C12orf49-204ENST00000548356 CCL19Q99731 98 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms