RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ACTR8Q9H981 624 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF358Q9NW07 568 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 ADGRE2Q9UHX3 823 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 PPT2Q9UMR5 302 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 RNF11Q9Y3C5 154 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 TSC22D4Q9Y3Q8 395 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
CPSF6-204ENST00000547486 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 SYNDIG1LA6NDD5 238 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 H0YIV9 168 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PROM1O43490 865 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 TMPRSS11DO60235 418 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 EEDO75530 441 aaKnown RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 GFAPP14136 432 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 CNR1P21554 472 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PTX3P26022 381 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PTGER4P35408 488 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 FOLH1Q04609 750 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 GTF2H2Q13888 395 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PCBP2Q15366 365 aaKnown RBP eCLIP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 CPSF6Q16630 551 aaKnown RBP eCLIP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PIGGQ5H8A4 983 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 GTF2H2CQ6P1K8 395 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 GOLGA7Q7Z5G4 137 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 OR5L2Q8NGL0 311 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 TTTY12Q9BZ98 90 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 SEMA4BQ9NPR2 832 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-204ENST00000547486 ASB4Q9Y574 426 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 SPACA6W5XKT8 324 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PCNX1Q96RV3 2341 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
CPSF6-204ENST00000547486 PDZD2O15018 2839 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 A0A1W2PR48 441 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 GLOD5A6NK44 160 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 OR7A17O14581 309 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 CCL3P10147 92 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 TYK2P29597 1187 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 BSGP35613 385 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 PIK3CGP48736 1102 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 PLGLB1Q02325 96 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 FOXO1Q12778 655 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ASPHQ12797 758 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 MRM1Q6IN84 353 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 C8orf74Q6P047 294 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ARHGAP11AQ6P4F7 1023 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 LYPD8Q6UX82 237 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 CEP128Q6ZU80 1094 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 CCDC91Q7Z6B0 441 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ZCCHC7Q8N3Z6 543 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 L3MBTL4Q8NA19 623 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 WDR20Q8TBZ3 569 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 TANKQ92844 425 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 RBM18Q96H35 190 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 DGAT2Q96PD7 388 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 CDK15Q96Q40 435 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 VPS11Q9H270 941 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ACSS3Q9H6R3 686 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 DDX31Q9H8H2 851 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ZDHHC11Q9H8X9 412 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 SH2D2AQ9NP31 389 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 MS4A12Q9NXJ0 267 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 DMGDHQ9UI17 866 aaKnown RBP12.34□□□□□ -0.43
CPSF6-204ENST00000547486 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
CPSF6-204ENST00000547486 ABCA12Q86UK0 2595 aa12.33□□□□□ -0.43
CPSF6-204ENST00000547486 A0A0A6YYD5 115 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 A0A1W2PS29 197 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 NPIPA2E9PIF3 369 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 NPIPA3F8WFD2 350 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 UGDHO60701 494 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 NADKO95544 446 aaPredicted RBP12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GPR75O95800 540 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GBAP04062 536 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 CELA3AP09093 270 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 PIGAP37287 484 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 DNASE1L1P49184 302 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 SERPINB8P50452 374 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GTF3C1Q12789 2109 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 CUL3Q13618 768 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 GXYLT1Q4G148 440 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 TECRLQ5HYJ1 363 aa12.33□□□□□ -0.44
CPSF6-204ENST00000547486 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms