RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 LCKP06239 509 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 MVDP53602 400 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 PPP1CAP62136 330 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 SLC9A5Q14940 896 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 CLIP4Q8N3C7 705 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 AQP11Q8NBQ7 271 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 LINC00615Q96LM1 132 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-209ENST00000547018 RIPOR3Q96MK2 946 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 OR2M4Q96R27 311 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 MYNNQ9NPC7 610 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 C1GALT1Q9NS00 363 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 H0YAE9 185 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 MT-ND2P03891 347 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 DDCP20711 480 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 PIK3CBP42338 1070 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-209ENST00000547018 DUSP2Q05923 314 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 NPRL3Q12980 569 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF773Q6PK81 442 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 AMIGO1Q86WK6 493 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 SNX29P2Q8IUI4 249 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 METTL27Q8N6F8 245 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-209ENST00000547018 DNAJB8Q8NHS0 232 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 GPR174Q9BXC1 333 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 OR51I1Q9H343 314 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 SLC6A20Q9NP91 592 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 LHX9Q9NQ69 397 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 SCN3BQ9NY72 215 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 IL20RAQ9UHF4 553 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF639Q9UID6 485 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 BLOC1S6Q9UL45 172 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 ANGPT4Q9Y264 503 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 AP3M1Q9Y2T2 418 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 CACNA1EQ15878 2313 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 PLXNA2O75051 1894 aa12.07□□□□□ -0.48
SCAF11-209ENST00000547018 LOC100506127A0A0U1RQW1 187 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 CXorf51AA0A1B0GTR3 108 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 KRBA1A5PL33 1030 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 SOBPA7XYQ1 873 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 B4GALT2O60909 372 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 BMP10O95393 424 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 HOXB9P17482 250 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-209ENST00000547018 HTR1BP28222 390 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 CTSKP43235 329 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TPMTP51580 245 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 MADCAM1Q13477 382 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ANKDD1AQ495B1 522 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 GALNT18Q6P9A2 607 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 UBE3DQ7Z6J8 389 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TAF8Q7Z7C8 310 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 B3GNT8Q7Z7M8 397 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 RASGRP3Q8IV61 690 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 OR2L3Q8NG85 312 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 OR9A2Q8NGT5 310 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 RORBQ92753 470 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 RPL3LQ92901 407 aaKnown RBP12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ZG16BQ96DA0 208 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 HSPBAP1Q96EW2 488 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 C7orf34Q96L11 122 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 C1QTNF7Q9BXJ2 289 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 DUSP12Q9UNI6 340 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 PCDHGB3Q9Y5G1 929 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 KCNE3Q9Y6H6 103 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 LRIT2A6NDA9 550 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 MAGEB3O15480 346 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 PCDHGA12O60330 932 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 HTR1AP08908 422 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TRIM23P36406 574 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 VBP1P61758 197 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ZC3H14Q6PJT7 736 aaKnown RBP12.06□□□□□ -0.48
SCAF11-209ENST00000547018 Q6ZSR6 202 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 USP51Q70EK9 711 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ELSPBP1Q96BH3 223 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 GLIPR2Q9H4G4 154 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 SEMA3GQ9NS98 782 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ATP6V1HQ9UI12 483 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TRBV4-1A0A0J9YWV2 114 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 A0A1W2PR48 441 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TNFRSF21O75509 655 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 IFNW1P05000 195 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 HMGN2P05204 90 aaKnown RBP12.06□□□□□ -0.48
SCAF11-209ENST00000547018 MC3RP41968 323 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 MLLT10P55197 1068 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 RPA4Q13156 261 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 TEAD4Q15561 434 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 IQCF1Q8N6M8 205 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 FAM46DQ8NEK8 389 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 APOL4Q9BPW4 351 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 MAPKAP1Q9BPZ7 522 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 ZNF717Q9BY31 904 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-209ENST00000547018 AICDAQ9GZX7 198 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 LYVE1Q9Y5Y7 322 aa12.06□□□□□ -0.48
SCAF11-209ENST00000547018 B4DGG1 531 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms