RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TCAIMQ8N3R3 496 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 SPACA9Q96E40 222 aaPredicted RBP24.68■■□□□ 1.54
CHFR-218ENST00000540963 WDR34Q96EX3 536 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 CTNNAL1Q9UBT7 734 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 DNALI1O14645 258 aaPredicted RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 DYRK3O43781 588 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 LDB3O75112 727 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 BANF1O75531 89 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 ATE1O95260 518 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 ETHE1O95571 254 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 IGKV3-11P04433 115 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 RFPL3SP0C7P2 107 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 BMP5P22003 454 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 IVDP26440 423 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 GGT5P36269 586 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 IGLV3-21P80748 117 aaPredicted RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 LTBQ06643 244 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 FRG1Q14331 258 aaKnown RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 SF3B4Q15427 424 aaKnown RBP eCLIP24.67■■□□□ 1.545e-7■■■□□ 19.2
CHFR-218ENST00000540963 KIF18BQ86Y91 864 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 LACC1Q8IV20 430 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 LIX1Q8N485 282 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 SREK1Q8WXA9 508 aaKnown RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 SENP5Q96HI0 755 aaPredicted RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 ART5Q96L15 291 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 RUNDC3BQ96NL0 473 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 TBCDQ9BTW9 1192 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 CNOT10Q9H9A5 744 aaKnown RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 GRPEL1Q9HAV7 217 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 TRMT1Q9NXH9 659 aaKnown RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 ZNF490Q9ULM2 529 aaPredicted RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 SNX12Q9UMY4 172 aa24.67■■□□□ 1.54
CHFR-218ENST00000540963 NSD1Q96L73 2696 aaPredicted RBP24.67■■□□□ 1.54
CHFR-218ENST00000540963 A0A1B0GTL3 188 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 CLGNO14967 610 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 EPXP11678 715 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 KEAP1Q14145 624 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 PPP1R7Q15435 360 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 TSNQ15631 228 aaKnown RBP24.66■■□□□ 1.54
CHFR-218ENST00000540963 CDKL4Q5MAI5 379 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 LYPD8Q6UX82 237 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 ANKRD9Q96BM1 317 aaPredicted RBP24.66■■□□□ 1.54
CHFR-218ENST00000540963 LRRC39Q96DD0 335 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 PTCD3Q96EY7 689 aaKnown RBP24.66■■□□□ 1.54
CHFR-218ENST00000540963 C18orf12Q96KH6 178 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 EFCAB11Q9BUY7 163 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 POPDC3Q9HBV1 291 aa24.66■■□□□ 1.54
CHFR-218ENST00000540963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.66■■□□□ 1.54
CHFR-218ENST00000540963 MYOCOSA0A1B0GUC4 107 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 LRRC3CA6NJW4 275 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 SCELO95171 688 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 HOXC12P31275 282 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 STT3AP46977 705 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 ILF2Q12905 390 aaKnown RBP24.65■■□□□ 1.54
CHFR-218ENST00000540963 LAPTM5Q13571 262 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 TGFBIQ15582 683 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 ACSF3Q4G176 576 aaPredicted RBP24.65■■□□□ 1.54
CHFR-218ENST00000540963 STEAP4Q687X5 459 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 TRMT10BQ6PF06 316 aaKnown RBP24.65■■□□□ 1.54
CHFR-218ENST00000540963 POMZP3Q6PJE2 187 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 ZC3HC1Q86WB0 502 aaKnown RBP24.65■■□□□ 1.54
CHFR-218ENST00000540963 NAXEQ8NCW5 288 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 VPS39Q96JC1 886 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 F2RL3Q96RI0 385 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 MAPKAP1Q9BPZ7 522 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 PROK2Q9HC23 129 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 DNAJC11Q9NVH1 559 aa24.65■■□□□ 1.54
CHFR-218ENST00000540963 CHCHD2Q9Y6H1 151 aaPredicted RBP24.65■■□□□ 1.54
CHFR-218ENST00000540963 GOLGA6L10A0A0M3HER8 536 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 TUBAL3A6NHL2 446 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 IL2RAP01589 272 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 TACR1P25103 407 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 ATP5A1P25705 553 aaKnown RBP24.64■■□□□ 1.54
CHFR-218ENST00000540963 SORDQ00796 357 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 C18orf21Q32NC0 220 aaPredicted RBP24.64■■□□□ 1.54
CHFR-218ENST00000540963 TMEM35AQ53FP2 167 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 PAGE2BQ5JRK9 111 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 TBCELQ5QJ74 424 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 C9orf40Q8IXQ3 194 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 PM20D2Q8IYS1 436 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 PDIK1LQ8N165 341 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 ACOT4Q8N9L9 421 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 TNIP2Q8NFZ5 429 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 FBXL20Q96IG2 436 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 DGAT2Q96PD7 388 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 DDX47Q9H0S4 455 aaKnown RBP24.64■■□□□ 1.54
CHFR-218ENST00000540963 SLC6A15Q9H2J7 730 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 ASIC3Q9UHC3 531 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 IKBKGQ9Y6K9 419 aa24.64■■□□□ 1.54
CHFR-218ENST00000540963 FAM95CA0A1B0GW59 222 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 ANKRD33BA6NCL7 494 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 CES2O00748 559 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 C1QAP02745 245 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 FBXO45P0C2W1 286 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 SERPINB3P29508 390 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 TAS2R39P59534 338 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 FBXW10Q5XX13 1052 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 ZNF793Q6ZN11 406 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 UBE3DQ7Z6J8 389 aa24.63■■□□□ 1.53
CHFR-218ENST00000540963 WFDC11Q8NEX6 87 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms