RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
SCNN1A-215ENST00000540037 PLXND1Q9Y4D7 1925 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 MPZL2O60487 215 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 BCHEP06276 602 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TRAPPC2P0DI81 140 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TRAPPC2BP0DI82 140 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 IMPA1P29218 277 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PDHA2P29803 388 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 CCND3P30281 292 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 AP1S2P56377 157 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 RBBP4Q09028 425 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 LMAN2Q12907 356 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 BRAT1Q6PJG6 821 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 DTX3Q8N9I9 347 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 UPRTQ96BW1 309 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 C2orf49Q9BVC5 232 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 HDHD5Q9BXW7 423 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 MCOLN1Q9GZU1 580 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 SPNS1Q9H2V7 528 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 FAM83DQ9H4H8 585 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 CTPS2Q9NRF8 586 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 B4GALT6Q9UBX8 382 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PCDHB7Q9Y5E2 793 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 DOCK6Q96HP0 2047 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 LOC102723532A0A0G2JNH3 316 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 GREM1O60565 184 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 HPGDSO60760 199 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TSC22D2O75157 780 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 KLK1P06870 262 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 FURINP09958 794 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 ELAVL4P26378 380 aaKnown RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 IL12RB1P42701 662 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 OR3A3P47888 321 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TLE2Q04725 743 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF763Q0D2J5 394 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 FCHO2Q0JRZ9 810 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TARDBPQ13148 414 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TCTN3Q6NUS6 607 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PLET1Q6UQ28 207 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 CASP12Q6UXS9 341 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 DPY19L3Q6ZPD9 716 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF740Q8NDX6 193 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 OR52I1Q8NGK6 324 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 PPCDCQ96CD2 204 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 MSLNLQ96KJ4 702 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 CASD1Q96PB1 797 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM38AQ9H6F2 299 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
SCNN1A-215ENST00000540037 XIRP2A4UGR9 3374 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 MYOFQ9NZM1 2061 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 A8MVJ9 347 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 MPC1LP0DKB6 136 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 EVI2BP34910 448 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 GZMKP49863 264 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 SNRPGP62308 76 aaKnown RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 UBE3AQ05086 875 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 NCF4Q15080 339 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 TRIM40Q6P9F5 258 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 PRR23CQ6ZRP0 262 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 COMTD1Q86VU5 262 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 OR2AP1Q8NGE2 309 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 ABCG4Q9H172 646 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 POLR2J3Q9H1A7 115 aaKnown RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 GALNT9Q9HCQ5 603 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM161AQ9NX61 479 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 MOSPD1Q9UJG1 213 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 TSPAN6O43657 245 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 SOCS5O75159 536 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 IGSF6O95976 241 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 ARAFP10398 606 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 CYP2A6P11509 494 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 UQCRC1P31930 480 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 SOX18P35713 384 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 SPINT3P49223 89 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 CTSCP53634 463 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 MLLT11Q13015 90 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 PIN1Q13526 163 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 HEPACAMQ14CZ8 416 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 CRTC2Q53ET0 693 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 DDI2Q5TDH0 399 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 B3GLCTQ6Y288 498 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 ZNF783Q6ZMS7 281 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 GDPGP1Q6ZNW5 385 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 Q8N402 240 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 OXR1Q8N573 874 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 HORMAD2Q8N7B1 307 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 GOT1L1Q8NHS2 421 aaPredicted RBP13.24□□□□□ -0.29
SCNN1A-215ENST00000540037 APOBEC4Q8WW27 367 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms