RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ACSL6Q9UKU0 697 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 RPL36Q9Y3U8 105 aaKnown RBP5.13□□□□□ -1.59
LRP6-203ENST00000538239 HK1P19367 917 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 FNTBP49356 437 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 EIF2B2P49770 351 aaKnown RBP5.13□□□□□ -1.59
LRP6-203ENST00000538239 DIO3P55073 304 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 SLC18A2Q05940 514 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 RPA4Q13156 261 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 TPRG1LQ5T0D9 272 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 ZFAND4Q86XD8 727 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 HORMAD2Q8N7B1 307 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 MFSD2AQ8NA29 543 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 ZSCAN4Q8NAM6 433 aaPredicted RBP5.13□□□□□ -1.59
LRP6-203ENST00000538239 ADAMTS18Q8TE60 1221 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 PEX13Q92968 403 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 AURKBQ96GD4 344 aaPredicted RBP5.13□□□□□ -1.59
LRP6-203ENST00000538239 SLC22A12Q96S37 553 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 COPS4Q9BT78 406 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 ALOXE3Q9BYJ1 711 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 EBF2Q9HAK2 575 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 ZBTB26Q9HCK0 441 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 MALT1Q9UDY8 824 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 ACAD8Q9UKU7 415 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 PRSS21Q9Y6M0 314 aa5.13□□□□□ -1.59
LRP6-203ENST00000538239 C17orf105B2RV13 164 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 E7ENX8 843 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 EI24O14681 340 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 GATBO75879 557 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 C1SP09871 688 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ARHGDIBP52566 201 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 EMP2P54851 167 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 DUSP6Q16828 381 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 OR2T5Q6IEZ7 315 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 OR6N2Q8NGY6 317 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 OR2T29Q8NH02 315 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 CREB3L4Q8TEY5 395 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 KLHL31Q9H511 634 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 GPRC5BQ9NZH0 403 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 RAB26Q9ULW5 256 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 COL18A1P39060 1754 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 FAM155AB1AL88 458 aaPredicted RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 PDLIM1O00151 329 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TNFRSF21O75509 655 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 SLC35E2BP0CK96 405 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 PGCP20142 388 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 MSX1P28360 303 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 PDHA2P29803 388 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 SLC9A3P48764 834 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 GSK3BP49841 420 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 GALK2Q01415 458 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ECH1Q13011 328 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ERV3-1Q14264 604 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 RBM48Q5RL73 367 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 LARP4Q71RC2 724 aaKnown RBP eCLIP5.12□□□□□ -1.59
LRP6-203ENST00000538239 CARM1Q86X55 608 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 C16orf78Q8WTQ4 265 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 NSMAFQ92636 917 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 RTP3Q9BQQ7 232 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 GINS4Q9BRT9 223 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 PHF7Q9BWX1 381 aaPredicted RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 PELI2Q9HAT8 420 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TRPV5Q9NQA5 729 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 PCDHGA6Q9Y5G7 932 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 C2orf92A0A1B0GVN3 265 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 A0A1W2PP18 115 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 CDC14CA4D256 554 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 SCAMP2O15127 329 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 RPLP0P05388 317 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 PEPDP12955 493 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ETS2P15036 469 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 NUDT1P36639 197 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 AFF3P51826 1226 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 XIAPP98170 497 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TMEM44Q2T9K0 475 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 RAB41Q5JT25 222 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 ARMC10Q8N2F6 343 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 JAGN1Q8N5M9 183 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TOR1AIP2Q8NFQ8 470 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 OR52B6Q8NGF0 335 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 OR52P1PQ8NH57 321 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 NODALQ96S42 347 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 SORBS1Q9BX66 1292 aaKnown RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 TMEM185BQ9H7F4 350 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 HSFX1Q9UBD0 423 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 VSTM2BA6NLU5 285 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TMX2-CTNND1H3BSU7 103 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 LDB3O75112 727 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 F11P03951 625 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ADORA3P0DMS8 318 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 FGF3P11487 239 aaPredicted RBP5.12□□□□□ -1.59
LRP6-203ENST00000538239 ZNF28P17035 718 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ZXDBP98169 803 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 DMPKQ09013 629 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ARFRP1Q13795 201 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 PON3Q15166 354 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 TCEAL1Q15170 157 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 C6orf136Q5SQH8 315 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 DCAF12Q5T6F0 453 aa5.12□□□□□ -1.59
LRP6-203ENST00000538239 ARL9Q6T311 187 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms