RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NPIPA2E9PIF3 369 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 NPIPA3F8WFD2 350 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 WWP2O00308 870 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 EIF3HO15372 352 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CDC40O60508 579 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 EPPINO95925 133 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CD1DP15813 335 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CERS1P27544 350 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ADH7P40394 386 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 MAGEA5P43359 124 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ART1P52961 327 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 PLA2G16P53816 162 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 IST1P53990 364 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 STX4Q12846 297 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 BMPR2Q13873 1038 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 HSPB2Q16082 182 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 NTRK2Q16620 822 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 PDK4Q16654 411 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF750Q32MQ0 723 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 DEPDC1Q5TB30 811 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 SLC22A10Q63ZE4 541 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 MRM1Q6IN84 353 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ARSKQ6UWY0 536 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 C16orf47Q6ZP98 133 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 SEM1Q6ZVN7 128 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CHSY3Q70JA7 882 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 LRRC70Q7Z2Q7 622 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CAMKMTQ7Z624 323 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CCDC91Q7Z6B0 441 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CREG2Q8IUH2 290 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 LIX1LQ8IVB5 337 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ST13P4Q8IZP2 240 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF441Q8N8Z8 693 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 OR5M3Q8NGP4 307 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 NEIL3Q8TAT5 605 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 TP53INP1Q96A56 240 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 TRIM44Q96DX7 344 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 SPACA9Q96E40 222 aaPredicted RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 TSPAN17Q96FV3 270 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CAPZA3Q96KX2 299 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 EGFL8Q99944 293 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 SH3GL2Q99962 352 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 PELOQ9BRX2 385 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CD244Q9BZW8 370 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 UBQLN3Q9H347 655 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 RNF14Q9UBS8 474 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 CHMP2BQ9UQN3 213 aa10.34□□□□□ -0.75
CLSTN3-206ENST00000535668 LRRC3CA6NJW4 275 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 CCDC188H7C350 402 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 CLGNO14967 610 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 UGDHO60701 494 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 TRIM3O75382 744 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 P04436 131 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 GSTA2P09210 222 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 CCL3P10147 92 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 COX7A2P14406 83 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 MAN2A2P49641 1150 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 HIST2H2ACQ16777 129 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 C1orf185Q5T7R7 199 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 WLSQ5T9L3 541 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 KHDRBS2Q5VWX1 349 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 HIST2H2AA3Q6FI13 130 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM47EQ6ZV65 393 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 FRA10AC1Q70Z53 315 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 ISCA2Q86U28 154 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 GPSM1Q86YR5 675 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 C9orf40Q8IXQ3 194 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 ZNF321PQ8N8H1 164 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM47BQ8NA70 645 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 OR7G3Q8NG95 312 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 RHEBL1Q8TAI7 183 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 SLC22A8Q8TCC7 542 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM222BQ8WU58 562 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 CMTM7Q96FZ5 175 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 F2RL3Q96RI0 385 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 CPNE1Q99829 537 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 MAPKAP1Q9BPZ7 522 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 ZNF717Q9BY31 904 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 OR8D2Q9GZM6 311 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 PRDM14Q9GZV8 571 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 COPS7BQ9H9Q2 264 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 TUBA8Q9NY65 449 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 JKAMPQ9P055 326 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 COPS7AQ9UBW8 275 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 ST6GALNAC2Q9UJ37 374 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 RPH3AQ9Y2J0 694 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 LIPGQ9Y5X9 500 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 SPACA6W5XKT8 324 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 NINQ8N4C6 2090 aa10.33□□□□□ -0.76
CLSTN3-206ENST00000535668 TRGV5A0A0B4J1U4 118 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM159BA6NKW6 160 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 FAM166BA8MTA8 275 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 H0YIV9 168 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 ZSCAN12O43309 604 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 PROM1O43490 865 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 FGF17O60258 216 aa10.32□□□□□ -0.76
CLSTN3-206ENST00000535668 PDE9AO76083 593 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms