RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TRMT61AQ96FX7 289 aaKnown RBP18.42■□□□□ 0.54
CAPN1-226ENST00000533820 SLC30A2Q9BRI3 323 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 SLC6A16Q9GZN6 736 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 BRF2Q9HAW0 419 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 TAS2R9Q9NYW1 312 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 SPG21Q9NZD8 308 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 EFCAB10A6NFE3 127 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 NPC1O15118 1278 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 OR10H3O60404 316 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 OLFM2O95897 454 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 IFNW1P05000 195 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 NPPBP16860 134 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 TNNI3P19429 210 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 RAB33AQ14088 237 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 IRF3Q14653 427 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 LRRC26Q2I0M4 334 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 TRIM60Q495X7 471 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 CEACAM20Q6UY09 585 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 TRMT11Q7Z4G4 463 aaKnown RBP18.42■□□□□ 0.54
CAPN1-226ENST00000533820 LINC00469Q8N7U9 141 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 WFDC6Q9BQY6 131 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 SRRDQ9UH36 339 aa18.42■□□□□ 0.54
CAPN1-226ENST00000533820 FFAR1O14842 300 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 ITGA2P17301 1181 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 CBLP22681 906 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 METAP1P53582 386 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 DSTNP60981 165 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 OLR1P78380 273 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 C19orf57Q0VDD7 668 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 COL9A2Q14055 689 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 PUM1Q14671 1186 aaKnown RBP eCLIP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 ATCAYQ86WG3 371 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 LAX1Q8IWV1 398 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 TRIM63Q969Q1 353 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 TRNT1Q96Q11 434 aaKnown RBP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 CCDC59Q9P031 241 aaKnown RBP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 ENPP4Q9Y6X5 453 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 GRM6O15303 877 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 SEC23BQ15437 767 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 PLAG1Q6DJT9 500 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 IL17RDQ8NFM7 739 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 BTN2A2Q8WVV5 523 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 UQCC2Q9BRT2 126 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 NXF2Q9GZY0 626 aaKnown RBP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 ATPIF1Q9UII2 106 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 PPIL1Q9Y3C6 166 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 TRAV19A0A0A6YYK7 116 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 PIPSLA2A3N6 862 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 FHP07954 510 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 VIPR1P32241 457 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 HSPB3Q12988 150 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 IGSF11Q5DX21 431 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 TMEM215Q68D42 235 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 TCEAL8Q8IYN2 117 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 OR56A3Q8NH54 315 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 OPALINQ96PE5 141 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 RAD9AQ99638 391 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 SPATA9Q9BWV2 254 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 BARHL1Q9BZE3 327 aa18.41■□□□□ 0.54
CAPN1-226ENST00000533820 BHLHE41Q9C0J9 482 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-226ENST00000533820 A0A0G2JN53 185 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 SERTM1A2A2V5 107 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 C5orf58C9J3I9 102 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 K7ESM1 405 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 CCL16O15467 120 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 GPR37L1O60883 481 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 EFEMP2O95967 443 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 TM4SF4P48230 202 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 Q5BKY6 102 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 ARMC4Q5T2S8 1044 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 MLIPQ5VWP3 458 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 LIPKQ5VXJ0 399 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF367Q7RTV3 350 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 FBXL6Q8N531 539 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 TCEANCQ8N8B7 351 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 ST13P5Q8NFI4 369 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 GLYATL1Q969I3 302 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF558Q96NG5 402 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 CPEB1Q9BZB8 566 aaKnown RBP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 OR2AG1Q9H205 316 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 CXorf36Q9H7Y0 433 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 DMRT3Q9NQL9 472 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 CFL2Q9Y281 166 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 DYRK1BQ9Y463 629 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 PLXND1Q9Y4D7 1925 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 TLR4O00206 839 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 PLK4O00444 970 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 RECKO95980 971 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 LRG1P02750 347 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 TIMP2P16035 220 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 LSM11P83369 360 aaKnown RBP eCLIP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 OXR1Q8N573 874 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 CRELD1Q96HD1 420 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 MAGEB10Q96LZ2 347 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 RSPO3Q9BXY4 272 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 BEX2Q9BXY8 128 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 ZNF106Q9H2Y7 1883 aaKnown RBP18.4■□□□□ 0.54
CAPN1-226ENST00000533820 SMURF1Q9HCE7 757 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 HHATLQ9HCP6 504 aa18.4■□□□□ 0.54
CAPN1-226ENST00000533820 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms