RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 NR4A3Q92570 626 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 SCMH1Q96GD3 660 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 C1QTNF3Q9BXJ4 246 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 SLC17A7Q9P2U7 560 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 VTI1BQ9UEU0 232 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 CLCA3PQ9Y6N3 262 aa15.54■□□□□ 0.08
PKP3-209ENST00000533069 USP9XQ93008 2570 aaPredicted RBP15.54■□□□□ 0.08
PKP3-209ENST00000533069 A8MT66 165 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 SEMA7AO75326 666 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 SEMA3DO95025 777 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 DDAH2O95865 285 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 OTCP00480 354 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 IFNA16P05015 189 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 GRK2P25098 689 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 TLX1P31314 330 aaPredicted RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 TRHRP34981 398 aaPredicted RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 SERPINB5P36952 375 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 MDH1P40925 334 aaKnown RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 CYB561P49447 251 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 TRAF3Q13114 568 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 BIKQ13323 160 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 MPP2Q14168 576 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 FRG2Q64ET8 278 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 GPR180Q86V85 440 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 NUDT13Q86X67 352 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 KIRREL3Q8IZU9 778 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 RNF175Q8N4F7 328 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 MORN4Q8NDC4 146 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 ZNF483Q8TF39 744 aaPredicted RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 NCLNQ969V3 563 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 SIGLEC12Q96PQ1 595 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 PSMG3-AS1Q96PY0 264 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 FRG2BQ96QU4 278 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 SERPINI1Q99574 410 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 ALOXE3Q9BYJ1 711 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 TRIM45Q9H8W5 580 aaPredicted RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 LYARQ9NX58 379 aaKnown RBP15.53■□□□□ 0.08
PKP3-209ENST00000533069 ANKRD10Q9NXR5 420 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 LRFN1Q9P244 771 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 FBXW2Q9UKT8 454 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 EMCNQ9ULC0 261 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 SLC5A6Q9Y289 635 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 COL12A1Q99715 3063 aa15.53■□□□□ 0.08
PKP3-209ENST00000533069 CPAMD8Q8IZJ3 1885 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 PTPN13Q12923 2485 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 KLF11O14901 512 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 NEURL1O76050 574 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 ZFAND5O76080 213 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 BPGMP07738 259 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 SBK3P0C264 359 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 NEFHP12036 1026 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 BUD31P41223 144 aaPredicted RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 HLCSP50747 726 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 GPR143P51810 404 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 TDGF1P3P51864 188 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 NEK2P51955 445 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 DNAJB13P59910 316 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 IGLV3-21P80748 117 aaPredicted RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 TNFRSF17Q02223 184 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 IFT88Q13099 833 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 ATG16L1Q676U5 607 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 TTC19Q6DKK2 380 aaPredicted RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 TMEM151AQ8N4L1 468 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 FAM98AQ8NCA5 519 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 TANKQ92844 425 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 NSUN5Q96P11 429 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 CDK15Q96Q40 435 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 PAIP2Q9BPZ3 127 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 SORBS1Q9BX66 1292 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 ZNF717Q9BY31 904 aaPredicted RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 CCDC134Q9H6E4 229 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 RPF2Q9H7B2 306 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 DDX31Q9H8H2 851 aaKnown RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 ZBTB26Q9HCK0 441 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 SEMA4BQ9NPR2 832 aaPredicted RBP15.52■□□□□ 0.08
PKP3-209ENST00000533069 OXSMQ9NWU1 459 aa15.52■□□□□ 0.08
PKP3-209ENST00000533069 RP1L1Q8IWN7 2480 aaPredicted RBP15.52■□□□□ 0.07
PKP3-209ENST00000533069 A0A0A6YYD5 115 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 TRIM13O60858 407 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 LDB3O75112 727 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 SLC25A12O75746 678 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 MLYCDO95822 493 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 SP1P08047 785 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 COX7A2P14406 83 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 BSGP35613 385 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 WDR4P57081 412 aaKnown RBP15.51■□□□□ 0.07
PKP3-209ENST00000533069 HERVK_113P63132 956 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 LIPMQ5VYY2 423 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 SPINK14Q6IE38 97 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 SLC25A25Q6KCM7 469 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 CYP20A1Q6UW02 462 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 RGS9BPQ6ZS82 235 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 MILR1Q7Z6M3 343 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 PPP1R14CQ8TAE6 165 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 MGARPQ8TDB4 240 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 PTPMT1Q8WUK0 201 aaPredicted RBP15.51■□□□□ 0.07
PKP3-209ENST00000533069 CKAP2Q8WWK9 683 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 TMEM125Q96AQ2 219 aa15.51■□□□□ 0.07
PKP3-209ENST00000533069 ANKRD9Q96BM1 317 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms