RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 FRMD6Q96NE9 622 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 EFHD1Q9BUP0 239 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 RPF2Q9H7B2 306 aaKnown RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 TMEM184CQ9NVA4 438 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 PCDHGB4Q9UN71 923 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ERVK-11Q9UQG0 969 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 MAN2B2Q9Y2E5 1009 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 TRBV5-3A0A0A0MS03 114 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 C10orf142B7Z368 130 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 CLIC1O00299 241 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 CAPN5O15484 640 aaPredicted RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 PRAMEF10O60809 474 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SMPD2O60906 423 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SCN2BO60939 215 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 FURINP09958 794 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 PVRP15151 417 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 PCSK2P16519 638 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 UGT2B7P16662 529 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ENGP17813 658 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 HRH2P25021 359 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 HTR1EP28566 365 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 PTPN6P29350 595 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SLC7A1P30825 629 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 BSGP35613 385 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 NUDT1P36639 197 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 CSNK1EP49674 416 aaKnown RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 NKX2-5P52952 324 aaPredicted RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 MAZP56270 477 aaKnown RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 RAB8AP61006 207 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 HHEXQ03014 270 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 DMWDQ09019 674 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 MINDY4Q4G0A6 757 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 LRIF1Q5T3J3 769 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 NUDT13Q86X67 352 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 AMER3Q8N944 861 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ICA1LQ8NDH6 482 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ZDHHC1Q8WTX9 485 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ZUFSPQ96AP4 578 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SLCO4A1Q96BD0 722 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SLC22A18Q96BI1 424 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 RADILQ96JH8 1075 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ZNF184Q99676 751 aaPredicted RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 CPPED1Q9BRF8 314 aaPredicted RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 WACQ9BTA9 647 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 KLHL31Q9H511 634 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 KAT8Q9H7Z6 458 aaKnown RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 SYNPO2LQ9H987 977 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 TM9SF3Q9HD45 589 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 MYNNQ9NPC7 610 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 HRASLS2Q9NWW9 162 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 ACTR10Q9NZ32 417 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 MAGEL2Q9UJ55 1249 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 RIMS3Q9UJD0 308 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SNX7Q9UNH6 387 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 RBMX2Q9Y388 322 aaKnown RBP7.33□□□□□ -1.24
SOX6-211ENST00000528429 ZDBF2Q9HCK1 2354 aa7.33□□□□□ -1.24
SOX6-211ENST00000528429 SNRNP200O75643 2136 aaKnown RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 CACNA1IQ9P0X4 2223 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 A0A0G2JPF8 293 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 ELOVL7A1L3X0 281 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 FAM149AA5PLN7 773 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 LRIT2A6NDA9 550 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 AQP12BA6NM10 295 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 HNRNPCL3B7ZW38 293 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 TLR4O00206 839 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 TMPRSS11DO60235 418 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 BRINP1O60477 761 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 NDUFS6O75380 124 aaKnown RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 CLEC3AO75596 197 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 KLHL18O94889 574 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 SEMA3DO95025 777 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 C6orf47O95873 294 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 PDGFBP01127 241 aaPredicted RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 HNRNPCL4P0DMR1 293 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 SERPINB1P30740 379 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 SOAT1P35610 550 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 HPCAP84074 193 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 FOXK2Q01167 660 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 SPATS1Q496A3 300 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 TOR1AIP1Q5JTV8 583 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 SNAP47Q5SQN1 464 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 OR7E24Q6IFN5 339 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 FAM71E1Q6IPT2 247 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 NUP54Q7Z3B4 507 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 R3HCC1LQ7Z5L2 792 aaKnown RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 PTRH1Q86Y79 214 aaKnown RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 AQP12AQ8IXF9 295 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 UBALD2Q8IYN6 164 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 ZNF619Q8N2I2 560 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 GALNT4Q8N4A0 578 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 MFSD2AQ8NA29 543 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 ZNF548Q8NEK5 533 aaPredicted RBP7.32□□□□□ -1.24
SOX6-211ENST00000528429 OR8K5Q8NH50 307 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 OR5AK3PQ8NH89 298 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 FBXO30Q8TB52 745 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.32□□□□□ -1.24
SOX6-211ENST00000528429 CREB3L4Q8TEY5 395 aa7.32□□□□□ -1.24
SOX6-211ENST00000528429 HDAC2Q92769 488 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms