RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 U2AF2P26368 475 aaKnown RBP eCLIP3.38□□□□□ -1.87
CD44-219ENST00000525685 SFNP31947 248 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 PRKCEQ02156 737 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 PPP2R5CQ13362 524 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ORC2Q13416 577 aaPredicted RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 TNK1Q13470 666 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ZNF74Q16587 644 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 HLA-BQ31612 363 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 FAM174BQ3ZCQ3 159 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 BSPRYQ5W0U4 402 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 CYB5D1Q6P9G0 228 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 TRAT1Q6PIZ9 186 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 FCRLAQ7L513 359 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 MIER3Q7Z3K6 550 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 SPATA19Q7Z5L4 167 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 PIGWQ7Z7B1 504 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 OTUD6BQ8N6M0 293 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 GBP7Q8N8V2 638 aaPredicted RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 MAPK15Q8TD08 544 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 AFAP1L1Q8TED9 768 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 BADQ92934 168 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 FAM162AQ96A26 154 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 MTMR9Q96QG7 549 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 TSPAN18Q96SJ8 248 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 PRO3102Q9H379 93 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ACTL8Q9H568 366 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 AZI2Q9H6S1 392 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 ZNF302Q9NR11 478 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 C2orf42Q9NWW7 574 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 CHCHD3Q9NX63 227 aaKnown RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 ERAP1Q9NZ08 941 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 CACNG5Q9UF02 275 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 RASAL2Q9UJF2 1139 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 EXOGQ9Y2C4 368 aaKnown RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 SELENOKQ9Y6D0 94 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 COLEC10Q9Y6Z7 277 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 COL1A2P08123 1366 aa3.38□□□□□ -1.87
CD44-219ENST00000525685 KIAA0100Q14667 2235 aaKnown RBP3.38□□□□□ -1.87
CD44-219ENST00000525685 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 MBLAC1A4D2B0 266 aaPredicted RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 TMEM150BA6NC51 233 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 TMEM150CB9EJG8 249 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 STX6O43752 255 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ZNF821O75541 412 aaPredicted RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 STBD1O95210 358 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 SLU7O95391 586 aaKnown RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 SEC24AO95486 1093 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 TIMP1P01033 207 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 C9P02748 559 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 RLN1P04808 185 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ATP1B1P05026 303 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 FAM58BPP0C7Q3 252 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ELAVL4P26378 380 aaKnown RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 SSTR1P30872 391 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 TSFMP43897 325 aaKnown RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 SLC26A2P50443 739 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 MFAP3P55082 362 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 CCL23P55773 120 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 RBP5P82980 135 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 BFSP1Q12934 665 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 PTK6Q13882 451 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 PTPN14Q15678 1187 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 MARCH8Q5T0T0 291 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ADAMTSL4-AS1Q5T5F5 129 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 CASC4Q6P4E1 433 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 FAM173BQ6P4H8 233 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 DCLRE1AQ6PJP8 1040 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 SLC24A5Q71RS6 500 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 BTN2A1Q7KYR7 527 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 SERINC5Q86VE9 423 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 RCOR2Q8IZ40 523 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 OR8H3Q8N146 312 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 TCEANCQ8N8B7 351 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 C4orf32Q8N8J7 132 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 OR1L3Q8NH93 324 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 RAD54LQ92698 747 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ATP6V0A1Q93050 837 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ST6GALNAC6Q969X2 333 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ATP6V1E2Q96A05 226 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 ZNF486Q96H40 463 aaPredicted RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 C10orf90Q96M02 699 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 INTS14Q96SY0 518 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 CDCA3Q99618 268 aaPredicted RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 ADPGKQ9BRR6 497 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 LXNQ9BS40 222 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 TRIM51Q9BSJ1 452 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 MINDY3Q9H8M7 445 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 SPHK2Q9NRA0 654 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 MAN2C1Q9NTJ4 1040 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 WRAP73Q9P2S5 460 aaPredicted RBP3.37□□□□□ -1.87
CD44-219ENST00000525685 GTF3C4Q9UKN8 822 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 NCKAP1Q9Y2A7 1128 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 PYGO1Q9Y3Y4 419 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 NRCAMQ92823 1304 aa3.37□□□□□ -1.87
CD44-219ENST00000525685 PTPRSQ13332 1948 aa3.36□□□□□ -1.87
CD44-219ENST00000525685 BRCA2P51587 3418 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms