RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GMEB2Q9UKD1 530 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 NRIP1P48552 1158 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 HK3P52790 923 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 NUS1Q96E22 293 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SYT3Q9BQG1 590 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SLC28A3Q9HAS3 691 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 LGALS13Q9UHV8 139 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SLC22A14Q9Y267 594 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 PEX12O00623 359 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 TFP02787 698 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CDKN2BP42772 138 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 DHCR24Q15392 516 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 KLBQ86Z14 1044 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 COG8Q96MW5 612 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SRA1Q9HD15 236 aaKnown RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 PPLO60437 1756 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 F5H5P2 479 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 OR7A17O14581 309 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 MAFO75444 373 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 DCNP07585 359 aaKnown RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ADRB3P13945 408 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CREB1P16220 341 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 BDKRB1P46663 353 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ART1P52961 327 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ERVK-16P61578 105 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 MON1BQ7L1V2 547 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SMIM15Q7Z3B0 74 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ZFP41Q8N8Y5 198 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 RBCK1Q9BYM8 510 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 MAGED1Q9Y5V3 778 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 C6P13671 934 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 NPBWR1P48145 328 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 PITPNBP48739 271 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 GLUD2P49448 558 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SCML4Q8N228 414 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 TM9SF4Q92544 642 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 NELL2Q99435 816 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SMCO4Q9NRQ5 59 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 SOCS2O14508 198 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 NIPSNAP2O75323 286 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 CILPO75339 1184 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ALDOBP05062 364 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ALPIP09923 528 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 BLKP51451 505 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 TRAM2Q15035 370 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PAQR3Q6TCH7 311 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ERMP1Q7Z2K6 904 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ZSWIM9Q86XI8 627 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 CSNK2A3Q8NEV1 391 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 SLC22A17Q8WUG5 538 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 LMF1Q96S06 567 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 MCHR1Q99705 422 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 LHX5Q9H2C1 402 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 RAB19A4D1S5 217 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 MTX2O75431 263 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 SLC22A5O76082 557 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 STK17BO94768 372 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ATE1O95260 518 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 SNAP29O95721 258 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 UCHL1P09936 223 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 C20orf202A1L168 122 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 RFC2P35250 354 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 PBX3P40426 434 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 RAB8AP61006 207 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
LRRK1-202ENST00000525284 GRIN2CQ14957 1233 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 FRG2Q64ET8 278 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF767PQ75MW2 155 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 FRG2BQ96QU4 278 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
LRRK1-202ENST00000525284 A6NHS1 94 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms