RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 ZNF321PQ8N8H1 164 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 C2CD4AQ8NCU7 369 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 OR2L5Q8NG80 312 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 CCT6BQ92526 530 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 Q96MF0 132 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 DOCK7Q96N67 2140 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 RUNDC3BQ96NL0 473 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 TIMP4Q99727 224 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 TRMT1Q9NXH9 659 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 EIF3LQ9Y262 564 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 SLC22A14Q9Y267 594 aa10.53□□□□□ -0.72
TRAPPC9-203ENST00000517667 SH3D21A4FU49 640 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 MBD3L4A6NDZ8 208 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 MBD3L3A6NE82 208 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 MBD3L5A6NJ08 208 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CASKO14936 926 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 SMAD7O15105 426 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ERN1O75460 977 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CLEC3AO75596 197 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 BMP7P18075 431 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CERS1P27544 350 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 SERPINB3P29508 390 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 KCNJ1P48048 391 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 TRPC1P48995 793 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 PLA2G16P53816 162 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 TERF1P54274 439 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CDKN2DP55273 166 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 WNT3P56703 355 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 TGM3Q08188 693 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ADPRMQ3LIE5 342 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 KRT78Q8N1N4 520 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 VWA5B2Q8N398 1253 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 FAM13CQ8NE31 585 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 MCUQ8NE86 351 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 MBD3L2Q8NHZ7 208 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ZNF721Q8TF20 911 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ART5Q96L15 291 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ZNF597Q96LX8 424 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 JSRP1Q96MG2 331 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 SERPINB12Q96P63 405 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 QRFPRQ96P65 431 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 SECISBP2Q96T21 854 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CSF3RQ99062 836 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 DOHHQ9BU89 302 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 PITHD1Q9GZP4 211 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 EPB41L4BQ9H329 900 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 IARS2Q9NSE4 1012 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 CHCHD2Q9Y6H1 151 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 SPACA6W5XKT8 324 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 ARID1AO14497 2285 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 FREM3P0C091 2139 aa10.52□□□□□ -0.73
TRAPPC9-203ENST00000517667 A0A1W2PPR1 153 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 ANKDD1BA6NHY2 528 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 KDM4EB2RXH2 506 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 FGGP02679 453 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 C1QAP02745 245 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 CCDC175P0C221 793 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 C1GALT1C1LP0DN25 315 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 FPR1P21462 350 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 RPL21P46778 160 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 CPA2P48052 419 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 VPS41P49754 854 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 HNMTP50135 292 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 BIKQ13323 160 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 RCAN2Q14206 197 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 TRIP13Q15645 432 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 PPP1R3AQ16821 1122 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 NHSL2Q5HYW2 709 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 RBM20Q5T481 1227 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 ANKRD22Q5VYY1 191 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 VASNQ6EMK4 673 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 SBSNQ6UWP8 590 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 SYDE1Q6ZW31 735 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 YTHDF3Q7Z739 585 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 LRRC8AQ8IWT6 810 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 ZFP3Q96NJ6 502 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 TRIB1Q96RU8 372 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 WDR83Q9BRX9 315 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 SFXN3Q9BWM7 321 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 RBM24Q9BX46 236 aaKnown RBP10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 ROGDIQ9GZN7 287 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 NT5DC2Q9H857 520 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 CALHM2Q9HA72 323 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 LYRM4Q9HD34 91 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 NDRG3Q9UGV2 375 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 CAMK2AQ9UQM7 478 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 IKBKGQ9Y6K9 419 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 KIAA1549Q9HCM3 1950 aa10.51□□□□□ -0.73
TRAPPC9-203ENST00000517667 NINQ8N4C6 2090 aa10.5□□□□□ -0.73
TRAPPC9-203ENST00000517667 NBEAL1Q6ZS30 2694 aa10.5□□□□□ -0.73
TRAPPC9-203ENST00000517667 ANKRD33BA6NCL7 494 aa10.5□□□□□ -0.73
TRAPPC9-203ENST00000517667 GOLGA8MH3BSY2 632 aa10.5□□□□□ -0.73
TRAPPC9-203ENST00000517667 LDB3O75112 727 aa10.5□□□□□ -0.73
TRAPPC9-203ENST00000517667 TRIM3O75382 744 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms