RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NUP107P57740 925 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CXCR4P61073 352 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RPL23AP62750 156 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RPL10AP62906 217 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RELAQ04206 551 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 STX3Q13277 289 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 EXT1Q16394 746 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SNAPC1Q16533 368 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 COQ5Q5HYK3 327 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CATSPEREQ5SY80 951 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF7Q5VXH5 474 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SCARA3Q6AZY7 606 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 C4orf22Q6V702 233 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSDL2Q6YN16 418 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 C11orf57Q6ZUT1 292 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 VN1R5Q7Z5H4 357 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZFAND4Q86XD8 727 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRRC17Q8N6Y2 441 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAFAQ8NHW3 353 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NUDT8Q8WV74 236 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GAB3Q8WWW8 586 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SEMA4DQ92854 862 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MTERF3Q96E29 417 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TGS1Q96RS0 853 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTRCQ99895 268 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLPBQ9H078 707 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SIRPDQ9H106 197 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SMOC2Q9H3U7 446 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRRN3Q9H3W5 708 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM231Q9H6L2 316 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 WDCPQ9H6R7 721 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CHST11Q9NPF2 352 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ASCL3Q9NQ33 180 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ABCB10Q9NRK6 738 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 EXD2Q9NVH0 621 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SYBUQ9NX95 663 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 UVRAGQ9P2Y5 699 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDH22Q9UJ99 828 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTNND2Q9UQB3 1225 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 C2orf71A6NGG8 1288 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 FBP2O00757 339 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLDN4O14493 209 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NRP1O14786 923 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 HS6ST1O60243 411 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAGEC1O60732 1142 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ATG13O75143 517 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GLCEO94923 617 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZWINTO95229 277 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NR3C1P04150 777 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANXA4P09525 319 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RNF224P0DH78 156 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACP5P13686 325 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GFAPP14136 432 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 COX7A2P14406 83 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CEBPBP17676 345 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TNNI1P19237 187 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MGAT1P26572 445 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GIFP27352 417 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSD11B1P28845 292 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 THBS2P35442 1172 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPD2P43304 727 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAGEB1P43366 347 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC6A11P48066 632 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 P2RY4P51582 365 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CACNA2D1P54289 1103 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MLF1P58340 268 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 EFNB1P98172 346 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PMPCAQ10713 525 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC29A2Q14542 456 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SHBQ15464 509 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ETFDHQ16134 617 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SNRNP35Q16560 246 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 BRMS1LQ5PSV4 323 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM211Q6ICI0 200 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLEKHA7Q6IQ23 1121 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM220Q6QAJ8 160 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM151BQ6UXP7 276 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NAGSQ8N159 534 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRAM1L1Q8N609 369 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 C1orf52Q8N6N3 182 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 RNF148Q8N7C7 305 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 BEND2Q8NDZ0 799 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCNG3Q8TAE7 436 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 FNDC8Q8TC99 324 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GTF3AQ92664 365 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NXNL1Q96CM4 212 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PTCD3Q96EY7 689 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 WDR89Q96FK6 387 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PACRGQ96M98 296 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CDX2Q99626 313 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms