RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 HTR1EP28566 365 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 GJB2P29033 226 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 UBA7P41226 1012 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 RAD23BP54727 409 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 DRG2P55039 364 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 MAZP56270 477 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 INCA1Q0VD86 236 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 NR1D2Q14995 579 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ZNF630Q2M218 657 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 SGSM1Q2NKQ1 1148 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 SPECC1LQ69YQ0 1117 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 RAD9BQ6WBX8 426 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 TAF8Q7Z7C8 310 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 VPS36Q86VN1 386 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 TGIF2LYQ8IUE0 185 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 TMTC1Q8IUR5 882 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 LGI2Q8N0V4 545 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 CCAR2Q8N163 923 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 ESX1Q8N693 406 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ST6GALNAC3Q8NDV1 305 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 DENND6BQ8NEG7 585 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 FDCSPQ8NFU4 85 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 CCL4L1Q8NHW4 92 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 HMGCLL1Q8TB92 370 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ITLN2Q8WWU7 325 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 ZNF354BQ96LW1 612 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 EGFL8Q99944 293 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 DDX50Q9BQ39 737 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 NUDT9Q9BW91 350 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ING2Q9H160 280 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 DPEP2Q9H4A9 486 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 FKRPQ9H9S5 495 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 OLFML3Q9NRN5 406 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ABCC13Q9NSE7 274 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ZNF624Q9P2J8 865 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 IL36AQ9UHA7 158 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ITM2BQ9Y287 266 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 RPH3AQ9Y2J0 694 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 FN1P02751 2386 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 ARGFXA6NJG6 315 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 A8MU76 341 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 POLR1CO15160 346 aaPredicted RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 CLIC2O15247 247 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 FTCDO95954 541 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 TNFP01375 233 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 FGF1P05230 155 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 FYNP06241 537 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 HOXA1P49639 335 aaPredicted RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 EFNB1P98172 346 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 FOXM1Q08050 763 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 BIRC3Q13489 604 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 CHRNA6Q15825 494 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 Q71RC1 249 aaPredicted RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 ARHGAP22Q7Z5H3 698 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 SLC47A2Q86VL8 602 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 KCNMB4Q86W47 210 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 IQCKQ8N0W5 287 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 ANKRD52Q8NB46 1076 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 HUS1BQ8NHY5 278 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 RHBDF1Q96CC6 855 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 RUFY1Q96T51 708 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 ZSCAN16Q9H4T2 348 aaPredicted RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 APOBEC3GQ9HC16 384 aaKnown RBP5.8□□□□□ -1.48
USP53-206ENST00000510737 CHST11Q9NPF2 352 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 HS3ST2Q9Y278 367 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
USP53-206ENST00000510737 IGHV1OR21-1A0A087WYE8 117 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 FRMD3A2A2Y4 597 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 A6NL46 340 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 LRRIQ3A6PVS8 624 aaPredicted RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 TMEM110-MUSTN1A8MSY1 372 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 C19orf84I3L1E1 186 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 SNAP91O60641 907 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 EIF5BO60841 1220 aaKnown RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 MOCS2O96007 188 aaPredicted RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 ASS1P00966 412 aaKnown RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 STSP08842 583 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 P4HA1P13674 534 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 RRM1P23921 792 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 ADIGQ0VDE8 80 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 ALCAMQ13740 583 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 SLC1A5Q15758 541 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 VWA2Q5GFL6 755 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 WDR38Q5JTN6 314 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 OR5R1Q8NH85 324 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 UBE2Q2Q8WVN8 375 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 PATE1Q8WXA2 126 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 OR1E3Q8WZA6 343 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 PIGTQ969N2 578 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 C14orf79Q96F83 325 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 PDXPQ96GD0 296 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 AK8Q96MA6 479 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 PSMB7Q99436 277 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 PRMT1Q99873 361 aaKnown RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 SMR3AQ99954 134 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 APOOQ9BUR5 198 aa5.79□□□□□ -1.48
USP53-206ENST00000510737 AKIRIN1Q9H9L7 192 aaPredicted RBP5.79□□□□□ -1.48
USP53-206ENST00000510737 BPIFA1Q9NP55 256 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms