RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 WWOXQ9NZC7 414 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CRIM1Q9NZV1 1036 aa14.66□□□□□ -0.06
RAB40C-202ENST00000509637 CNOT11Q9UKZ1 510 aaKnown RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.66□□□□□ -0.06
RAB40C-202ENST00000509637 GOLGA6L10A0A0M3HER8 536 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 ACOT7O00154 380 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 STK16O75716 305 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 FAM155BO75949 473 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 CD99P14209 185 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 GSTM2P28161 218 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 CASP2P42575 452 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 MSH2P43246 934 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 MAN2A2P49641 1150 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 HNRNPH2P55795 449 aaKnown RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 STX4Q12846 297 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 EFTUD2Q15029 972 aaKnown RBP eCLIP14.65□□□□□ -0.067e-7■■■■■ 38.1
RAB40C-202ENST00000509637 MPEG1Q2M385 716 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 FRA10AC1Q70Z53 315 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 TGIF2LYQ8IUE0 185 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 PDPRQ8NCN5 879 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 PAQR8Q8TEZ7 354 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 SGCZQ96LD1 299 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 FOXC2Q99958 501 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 SH3GL2Q99962 352 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 ZNF717Q9BY31 904 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 PITHD1Q9GZP4 211 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 KCNF1Q9H3M0 494 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 ZNF703Q9H7S9 590 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 POPDC3Q9HBV1 291 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 ALKBH4Q9NXW9 302 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 ACAD8Q9UKU7 415 aa14.65□□□□□ -0.06
RAB40C-202ENST00000509637 MRPS33Q9Y291 106 aaKnown RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 CHCHD2Q9Y6H1 151 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-202ENST00000509637 TRGV5A0A0B4J1U4 118 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 FIGNL2A6NMB9 653 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 CLGNO14967 610 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 PROM1O43490 865 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 HIST1H1TP22492 207 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-202ENST00000509637 STT3AP46977 705 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 TRPC1P48995 793 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 ARL4CP56559 192 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 FNDC7Q5VTL7 733 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 SLC22A10Q63ZE4 541 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 BICRALQ6AI39 1079 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 SULT1C3Q6IMI6 304 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 OPN5Q6U736 354 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 LAS2Q8IYD9 372 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 ULK2Q8IYT8 1036 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 LRRC25Q8N386 305 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-202ENST00000509637 TNIP2Q8NFZ5 429 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 OR10G3Q8NGC4 313 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 NTNG2Q96CW9 530 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 RUNDC3BQ96NL0 473 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 TBCDQ9BTW9 1192 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 RASSF1Q9NS23 344 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 ST6GALNAC2Q9UJ37 374 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 PLEKHA6Q9Y2H5 1048 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 SNX24Q9Y343 169 aa14.64□□□□□ -0.07
RAB40C-202ENST00000509637 LRRC14BA6NHZ5 514 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 SYT5O00445 386 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CCNT2O60583 730 aaKnown RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 WDR1O75083 606 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 ZWINTO95229 277 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 P04436 131 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 MTHFD2P13995 350 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 KLK2P20151 261 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CPN2P22792 545 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 GPX6P59796 221 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 DR1Q01658 176 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 POU4F1Q01851 419 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 IRF8Q02556 426 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 FOLH1Q04609 750 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 FOXD4Q12950 439 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 SLAMF1Q13291 335 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 SERTAD2Q14140 314 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CEBPEQ15744 281 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 ZKSCAN8Q15776 578 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 TBCCQ15814 346 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 PDK4Q16654 411 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 RIPPLY2Q5TAB7 128 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 DEPDC1Q5TB30 811 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 FAM219BQ5XKK7 198 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 WDR53Q7Z5U6 358 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 ISCA2Q86U28 154 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CLYBLQ8N0X4 340 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 BBOF1Q8ND07 529 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 OR7G3Q8NG95 312 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 NUBPLQ8TB37 319 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 EXT2Q93063 718 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 KIAA1191Q96A73 305 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 SPACA9Q96E40 222 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 KCNC2Q96PR1 638 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 ATOH8Q96SQ7 321 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 GPR22Q99680 433 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 EFCAB11Q9BUY7 163 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CAPS2Q9BXY5 557 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 POLDIP3Q9BY77 421 aaKnown RBP14.63□□□□□ -0.07
RAB40C-202ENST00000509637 CD244Q9BZW8 370 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 LDAHQ9H6V9 325 aa14.63□□□□□ -0.07
RAB40C-202ENST00000509637 COPS7BQ9H9Q2 264 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms