RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PPT2Q9UMR5 302 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 EXO1Q9UQ84 846 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PLLPQ9Y342 182 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TIMM22Q9Y584 194 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ANKDD1BA6NHY2 528 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SAGE2PA6NJ88 616 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 FOXE1O00358 373 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 COPEO14579 308 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CTIFO43310 598 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SUV39H1O43463 412 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 LDB3O75112 727 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 LYPLA1O75608 230 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SUPT7LO94864 414 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SEMA3DO95025 777 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 F10P00742 488 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 MYL2P10916 166 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 RNH1P13489 461 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 H2AFXP16104 143 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CXCR2P25025 360 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SERPINB3P29508 390 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SSR2P43308 183 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CCNG1P51959 295 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 NAGLUP54802 743 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 MTTPP55157 894 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SLC26A5P58743 744 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 DNAJB13P59910 316 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 STXBP1P61764 594 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 KRT71Q3SY84 523 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SGO1Q5FBB7 561 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 VWA5B1Q5TIE3 1220 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF468Q5VIY5 522 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CLEC6AQ6EIG7 209 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 TRIM40Q6P9F5 258 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 GPRIN3Q6ZVF9 776 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 ASB18Q6ZVZ8 466 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 NDUFAF7Q7L592 441 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 COMMD6Q7Z4G1 85 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CUZD1Q86UP6 607 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 OR4N5Q8IXE1 308 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 METTL4Q8N3J2 472 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 ZCCHC7Q8N3Z6 543 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SIRT6Q8N6T7 355 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SIMC1Q8NDZ2 872 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 GATAD2BQ8WXI9 593 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 ARL8AQ96BM9 186 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 TLCD1Q96CP7 247 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CMTM7Q96FZ5 175 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 THOC3Q96J01 351 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SLC25A23Q9BV35 468 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 CAPS2Q9BXY5 557 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 HES7Q9BYE0 225 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 SLC29A3Q9BZD2 475 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 C20orf27Q9GZN8 174 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 DDX31Q9H8H2 851 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 PPCSQ9HAB8 311 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 HEY2Q9UBP5 337 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 TMCO1Q9UM00 188 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 ANGPTL3Q9Y5C1 460 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 TNPO3Q9Y5L0 923 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 MYO18BQ8IUG5 2567 aa6.73□□□□□ -1.33
TOPBP1-207ENST00000509162 NSG1A0A0A6YYJ2 146 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 GLOD5A6NK44 160 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 A8MUA0 341 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 B8ZZF3 427 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 MKRN2OSH3BPM6 223 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ITM2AO43736 263 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 B3GALT2O43825 422 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 H2AFYO75367 372 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ESRRBO95718 433 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 DDAH2O95865 285 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 OTCP00480 354 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 IGHEP01854 428 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 SERPINA7P05543 415 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CYC1P08574 325 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CT62P0C5K7 136 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 RNF224P0DH78 156 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PIM1P11309 404 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CPA3P15088 417 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 ITGA3P26006 1051 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 SERPINB1P30740 379 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 UQCRFS1P47985 274 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PGDP52209 483 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 SRSF1Q07955 248 aaKnown RBP eCLIP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 AIMP2Q13155 320 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CUL3Q13618 768 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 UGT3A2Q3SY77 523 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 TMEM35AQ53FP2 167 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 CEP85LQ5SZL2 805 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 LGSNQ5TDP6 509 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 MFSD4BQ5TF39 518 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 LIPMQ5VYY2 423 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 KANK2Q63ZY3 851 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 PLAG1Q6DJT9 500 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 OR4C11Q6IEV9 310 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 H3F3CQ6NXT2 135 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM180BQ6P0A1 224 aa6.72□□□□□ -1.33
TOPBP1-207ENST00000509162 LINC00114Q6XXX2 140 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms