RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FDXRP22570 491 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 PTBP1P26599 531 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 ADCYAP1R1P41586 468 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 OR1E2P47887 323 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 LILRA4P59901 499 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 DBPQ10586 325 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 LASP1Q14847 261 aaKnown RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SYT6Q5T7P8 510 aaPredicted RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 ZNF783Q6ZMS7 281 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 CLEC20AQ6ZU45 233 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 THOC6Q86W42 341 aaKnown RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 KLBQ86Z14 1044 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 ZDHHC14Q8IZN3 488 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 OR7D4Q8NG98 312 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 TRMT10AQ8TBZ6 339 aaKnown RBP7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC7A6Q92536 515 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 LURAP1Q96LR2 239 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SYT11Q9BT88 431 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 TTPALQ9BTX7 342 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 RAB11FIP5Q9BXF6 653 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SLC38A1Q9H2H9 487 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 GSKIPQ9P0R6 139 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SPATA31A5Q5VU36 1347 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 SPATA31A7Q8IWB4 1347 aa7.03□□□□□ -1.28
UBE2D3-224ENST00000508474 A0A0D9SG52 128 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 A0A1W2PPL8 197 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 NRP1O14786 923 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 TXNL1O43396 289 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 TSPAN15O95858 294 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 LALBAP00709 142 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SPATA31D3P0C874 917 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF35P13682 527 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 PTPN2P17706 415 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 HLA-DMAP28067 261 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 RBMS1P29558 406 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 WEE1P30291 646 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 GGT5P36269 586 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 FRKP42685 505 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CASP9P55211 416 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OPCMLQ14982 345 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 DUSP6Q16828 381 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 TIGD3Q6B0B8 471 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SPATA31D4Q6ZUB0 917 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 RFPL4BQ6ZWI9 263 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 GPC2Q8N158 579 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC5A8Q8N695 610 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 Q8N9G6 341 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 PPTC7Q8NI37 304 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SMAP2Q8WU79 429 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF514Q96K75 400 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 C5orf34Q96MH7 638 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CDC6Q99741 560 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 GAL3ST1Q99999 423 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR2S2Q9NQN1 319 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 RNF19AQ9NV58 838 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 RHCGQ9UBD6 479 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 FBXL3Q9UKT7 428 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZFP37Q9Y6Q3 630 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF541Q9H0D2 1346 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 TSPOAP1O95153 1857 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 C3P01024 1663 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 MYH6P13533 1939 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 PIGBOS1A0A0B4J2F0 54 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 hCG_1807616A0A1W2PRN6 198 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 METTL15A6NJ78 407 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 MSCO60682 206 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 POP4O95707 220 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CSF1P09603 554 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 GABRB3P28472 473 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 PTPN6P29350 595 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 HOXC8P31273 242 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CNR2P34972 360 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 MLLT1Q03111 559 aaPredicted RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 TLE2Q04725 743 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 DNM1P34Q6PK57 102 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 JAGN1Q8N5M9 183 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CLDN22Q8N7P3 220 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR5T3Q8NGG3 340 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR2L8Q8NGY9 312 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR8S1Q8NH09 359 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR56B4Q8NH76 319 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 FANK1Q8TC84 345 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZFAND1Q8TCF1 268 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OR5P2Q8WZ92 322 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SHISA4Q96DD7 197 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 HDHD5Q9BXW7 423 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 NSUN3Q9H649 340 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 PPP4R1LQ9P1A2 415 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 FBXW2Q9UKT8 454 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC22A14Q9Y267 594 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 OARD1Q9Y530 152 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF878C9JN71 531 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 H7C417 338 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 CPNE6O95741 557 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 S1PR4O95977 384 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 IGFALSP35858 605 aa7.02□□□□□ -1.29
UBE2D3-224ENST00000508474 ETV6P41212 452 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms