RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 CHURC1Q8WUH1 139 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 GTF3AQ92664 365 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 TAF15Q92804 592 aaKnown RBP eCLIP4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 DNASE1L2Q92874 299 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 MR1Q95460 341 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 C18orf12Q96KH6 178 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 SPATA17Q96L03 361 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 AGAP3Q96P47 875 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 LZTS2Q9BRK4 669 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 COA1Q9GZY4 146 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 UPF3AQ9H1J1 476 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 SH3GLB2Q9NR46 395 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 TEX10Q9NXF1 929 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 HACD3Q9P035 362 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 HOOK1Q9UJC3 728 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 ATAD5Q96QE3 1844 aa4.94□□□□□ -1.62
UBE2D3-217ENST00000504211 LOXHD1Q8IVV2 1947 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 PLIN4Q96Q06 1357 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 TRAV18A0A075B6X5 111 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 NPIPA3F8WFD2 350 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 SURF4O15260 269 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 SELENOFO60613 162 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 SAP30O75446 220 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 PRDM1O75626 825 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 MOCS2O96007 188 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 CALML3P27482 149 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 BTDP43251 543 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 TMEM50BP56557 158 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 FKBP1AP62942 108 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 SCARB2Q14108 478 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 FASTKD3Q14CZ7 662 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 MOGAT2Q3SYC2 334 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 C2CD6Q53TS8 623 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 GALNT17Q6IS24 598 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 GALNTL5Q7Z4T8 443 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 LUZP1Q86V48 1076 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 C4orf19Q8IY42 314 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 ZNF444Q8N0Y2 327 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 OR4D10Q8NGI6 311 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 PKP2Q99959 881 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 CITED2Q99967 270 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 CABLES2Q9BTV7 478 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 UBQLN3Q9H347 655 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 EXOC1Q9NV70 894 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 NDE1Q9NXR1 346 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 SLC12A6Q9UHW9 1150 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 MYO3BQ8WXR4 1341 aa4.93□□□□□ -1.62
UBE2D3-217ENST00000504211 LOC105371242A0A075B767 164 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 A0A0B4J203 849 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 SOCS3O14543 225 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 NEMFO60524 1076 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 PLEKHA8P1O95397 391 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 KRT5P13647 590 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 MARCKSP29966 332 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 TPM4P67936 248 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 LY6DQ14210 128 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 DUSP5Q16690 384 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 ZRANB3Q5FWF4 1079 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 ATP1A1-AS1Q5TC04 95 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 ZNF770Q6IQ21 691 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 KLHL10Q6JEL2 608 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 FBXL22Q6P050 247 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 MSANTD1Q6ZTZ1 278 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 STXBP4Q6ZWJ1 553 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 ZER1Q7Z7L7 766 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 CREBRFQ8IUR6 639 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 CCDC148Q8NFR7 591 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 PIBF1Q8WXW3 757 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 LURAP1Q96LR2 239 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 IWS1Q96ST2 819 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 MLPHQ9BV36 600 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 THUMPD3Q9BV44 507 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 C10orf88Q9H8K7 445 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 MINDY3Q9H8M7 445 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 VPS54Q9P1Q0 977 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 LNPEPQ9UIQ6 1025 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 RUVBL2Q9Y230 463 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 FER1L6Q2WGJ9 1857 aa4.92□□□□□ -1.62
UBE2D3-217ENST00000504211 RBBP6Q7Z6E9 1792 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 A0A087WZ39 114 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 NKX6-3A6NJ46 265 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 EPM2AB3EWF7 344 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 H3BMM5 538 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 NMT2O60551 498 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 TOP1P11387 765 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 KRT3P12035 628 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 EDNRAP25101 427 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 OR3A3P47888 321 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 ROR1Q01973 937 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 ORC2Q13416 577 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 FAM106AQ4KMX7 169 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 DOK6Q6PKX4 331 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 OLFM4Q6UX06 510 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 COX8CQ7Z4L0 72 aa4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 MYPOPQ86VE0 399 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 MEX3DQ86XN8 651 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-217ENST00000504211 ZNF713Q8N859 430 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms