RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 LRRC58Q96CX6 371 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 CADM1Q9BY67 442 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 C1orf21Q9H246 121 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 LANCL2Q9NS86 450 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ATAD3AQ9NVI7 634 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 PISDQ9UG56 409 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 BTNL2Q9UIR0 455 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 DCHS1Q96JQ0 3298 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 TEX51A0A1B0GUA7 166 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 MNAT1P51948 309 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 MAPK10P53779 464 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 BTG2P78543 158 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 MXRA7P84157 204 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 FOLH1Q04609 750 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 ART3Q13508 389 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 CEBPEQ15744 281 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 TRMT5Q32P41 509 aaKnown RBP22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 C6orf10Q5SRN2 563 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 OR52E8Q6IFG1 317 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 HACD2Q6Y1H2 254 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 DHDDSQ86SQ9 333 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 UTP4Q969X6 686 aaKnown RBP22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 COL26A1Q96A83 441 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 CLIP3Q96DZ5 547 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 GLIPR2Q9H4G4 154 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 WDR41Q9HAD4 459 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 CLK4Q9HAZ1 481 aaKnown RBP22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 CTSFQ9UBX1 484 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 PACSIN3Q9UKS6 424 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 PCDHB14Q9Y5E9 798 aa22.81■■□□□ 1.24
TNFRSF4-203ENST00000497869 MYO1GB0I1T2 1018 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 TMX2-CTNND1H3BSU7 103 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 PDPK1O15530 556 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 B4GALT2O60909 372 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 CPSF4O95639 269 aaKnown RBP22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 CDK4P11802 303 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 SOX18P35713 384 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 SKP1P63208 163 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 GAB1Q13480 694 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 SELPLGQ14242 412 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 VWA2Q5GFL6 755 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 LRIF1Q5T3J3 769 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 DEFB107AQ8IZN7 70 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 TBC1D20Q96BZ9 403 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 AURKBQ96GD4 344 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 ITCHQ96J02 903 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 AMDHD1Q96NU7 426 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 IKZF5Q9H5V7 419 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 GMPR2Q9P2T1 348 aaKnown RBP22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 TRPC4Q9UBN4 977 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 CDC14AQ9UNH5 594 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 MAP4K5Q9Y4K4 846 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 CNOT1A5YKK6 2376 aaKnown RBP22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 SEC16AO15027 2179 aa22.8■■□□□ 1.24
TNFRSF4-203ENST00000497869 A0A1W2PRB8 838 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 PLD2O14939 933 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 GYG2O15488 501 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 HNRNPCL1O60812 293 aaKnown RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 KCNK5O95279 499 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 KRT16P08779 473 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 FBLP22087 321 aaKnown RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 TLX1P31314 330 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 KCNJ2P63252 427 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 ARHGAP40Q5TG30 622 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 ANXA8L1Q5VT79 327 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 ZC3H7AQ8IWR0 971 aaKnown RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CCDC116Q8IYX3 515 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 PCYOX1LQ8NBM8 494 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 ROPN1LQ96C74 230 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CLPTM1LQ96KA5 538 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 SLC7A5P2Q9GIP4 190 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 SIRT3Q9NTG7 399 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 DLL3Q9NYJ7 618 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 AKAP7Q9P0M2 348 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CCDC187A0A096LP49 1063 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 A0A096LPI6 279 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 C9orf172C9J069 976 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 RFXANKO14593 260 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 GSC2O15499 205 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CNOT3O75175 753 aaKnown RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 BMP10O95393 424 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 ONECUT2O95948 504 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 FHP07954 510 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 SLC6A2P23975 617 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CDK9P50750 372 aaKnown RBP22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 PSME3P61289 254 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 NKAIN1Q4KMZ8 207 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 PANX1Q96RD7 426 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 RMND5AQ9H871 391 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 PRDM9Q9NQV7 894 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 CROTQ9UKG9 612 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 SATB2Q9UPW6 733 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 SPACA6W5XKT8 324 aa22.79■■□□□ 1.24
TNFRSF4-203ENST00000497869 MEN1O00255 615 aa22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 CPNE3O75131 537 aaKnown RBP22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 SORBS2O94875 1100 aaKnown RBP22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 ABCB1P08183 1280 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 XKP51811 444 aa22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 LTB4RQ15722 352 aa22.78■■□□□ 1.24
TNFRSF4-203ENST00000497869 RABL3Q5HYI8 236 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms