RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GPR63Q9BZJ6 419 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PTGESO14684 152 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 B4GALT3O60512 393 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 VIPR1P32241 457 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 ADAM15Q13444 863 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 KCNC3Q14003 757 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 OR4A15Q8NGL6 344 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 CREB3L1Q96BA8 519 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PARK7Q99497 189 aaKnown RBP12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 ATG10Q9H0Y0 220 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 RPL36Q9Y3U8 105 aaKnown RBP12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PCDHGB7Q9Y5F8 929 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 EBLN1P0CF75 366 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MAPK1P28482 360 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 SOX18P35713 384 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 FABP5Q01469 135 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 DEFA5Q01523 94 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 SEMG2Q02383 582 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PUDPQ08623 228 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MARCH8Q5T0T0 291 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 CCNJQ5T5M9 372 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 FAM180BQ6P0A1 224 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC30A8Q8IWU4 369 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 DUSP26Q9BV47 211 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 DHRS7Q9Y394 339 aa12.47□□□□□ -0.41
GAPVD1-220ENST00000497580 PI15O43692 258 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 MPZL2O60487 215 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 GATBO75879 557 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC25A27O95847 323 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 GBAP04062 536 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SMIM10L2AP0DMW4 78 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SMIM10L2BP0DMW5 78 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 RPS12P25398 132 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 HOXC13P31276 330 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 GKP32189 559 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 MAZP56270 477 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 HEPACAMQ14CZ8 416 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 RGNQ15493 299 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 C2orf69Q8N8R5 385 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 CTPS2Q9NRF8 586 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 GNG14A0A1W2PPG7 69 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 ITGB7P26010 798 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 BDKRB1P46663 353 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 XKP51811 444 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TAF1AQ15573 450 aaPredicted RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TIGD5Q53EQ6 642 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 AFMIDQ63HM1 303 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 CXorf57Q6NSI4 855 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 DEF8Q6ZN54 512 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 ANKRD53Q8N9V6 530 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 OR8K3Q8NH51 312 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SCRN2Q96FV2 425 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 SEC22CQ9BRL7 303 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TMEM175Q9BSA9 504 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 PCDHB11Q9Y5F2 797 aa12.46□□□□□ -0.41
GAPVD1-220ENST00000497580 TRBC2A0A5B9 178 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 PRAMEF25A6NGN4 478 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ZNF98A6NK75 572 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 CA12O43570 354 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 BNIP3LO60238 219 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 DARSP14868 501 aaKnown RBP12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 CELP19835 753 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 GIFP27352 417 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ALDH9A1P49189 494 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 CCR6P51684 374 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 SCARB2Q14108 478 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ELOAQ14241 798 aaKnown RBP12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 RFT1Q96AA3 541 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ZNF578Q96N58 590 aaPredicted RBP12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 HPF1Q9NWY4 346 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 OR6C2Q9NZP2 312 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 TNFRSF10DQ9UBN6 386 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 FBXL2Q9UKC9 423 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 GPR52Q9Y2T5 361 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms