RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 HCN1O60741 890 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 WBP4O75554 376 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GLCEO94923 617 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MATN4O95460 622 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NADKO95544 446 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MMP10P09238 476 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PPP3CBP16298 524 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MMP8P22894 467 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DCKP27707 260 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 IL12BP29460 328 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CASP1P29466 404 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ECHS1P30084 290 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SDHAP31040 664 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 HOXA13P31271 388 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 BLOC1S1P78537 153 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 IL9RQ01113 521 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC34A1Q06495 639 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FOXM1Q08050 763 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MTAPQ13126 283 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 AQP6Q13520 282 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GANABQ14697 944 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PTGR1Q14914 329 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GRK1Q15835 563 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC18A3Q16572 532 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PDK4Q16654 411 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GALNTL6Q49A17 601 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZBED5Q49AG3 693 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MTX3Q5HYI7 312 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PHYHD1Q5SRE7 291 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM200BQ69YZ2 307 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NADSYN1Q6IA69 706 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 WBP2NLQ6ICG8 309 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FRMPD2BQ6IN97 320 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NANOGP8Q6NSW7 305 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 XKRXQ6PP77 449 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MOXD1Q6UVY6 613 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 USP30Q70CQ3 517 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CENPUQ71F23 418 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CHST9Q7L1S5 443 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 YRDCQ86U90 279 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CIR1Q86X95 450 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NRROSQ86YC3 692 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TGIF2LXQ8IUE1 241 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM58AQ8N1B3 248 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF610Q8N9Z0 462 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM83FQ8NEG4 500 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR7G3Q8NG95 312 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR6Y1Q8NGX8 325 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GRHL3Q8TE85 626 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SELENOMQ8WWX9 145 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 P2RX5Q93086 422 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TOP1MTQ969P6 601 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 TMCO6Q96DC7 493 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FBXO17Q96EF6 278 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 AJUBAQ96IF1 538 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SNX22Q96L94 193 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR92Q96MX6 357 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GAD1Q99259 594 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SERPINI1Q99574 410 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 EBNA1BP2Q99848 306 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAM2Q99965 735 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 P2RY13Q9BPV8 354 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR77Q9BQA1 342 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 HINT2Q9BX68 163 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PCBD2Q9H0N5 130 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CDT1Q9H211 546 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NXF3Q9H4D5 531 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF556Q9HAH1 456 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 VAT1LQ9HCJ6 419 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ABCB9Q9NP78 766 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MMP25Q9NPA2 562 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PPANQ9NQ55 473 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 BABAM2Q9NXR7 383 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PLEK2Q9NYT0 353 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RWDD2AQ9UIY3 292 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PPIEQ9UNP9 301 aaKnown RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RHBDD3Q9Y3P4 386 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MAB21L2Q9Y586 359 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 NFS1Q9Y697 457 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SHANK2Q9UPX8 1470 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RAPGEF2Q9Y4G8 1499 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 FMN1Q68DA7 1419 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PNPLA6Q8IY17 1366 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ABCC12Q96J65 1359 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRF5Q8IZF2 1346 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A087WZY1 265 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1W2PPC1 479 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 LINC00862A6NCI5 91 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C9orf118A6NHY6 69 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 CD8B2A6NJW9 211 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DUXAA6NLW8 204 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SERPINE3A8MV23 424 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 BTBD18B2RXH4 712 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 G3V2T6 193 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PAPSS1O43252 624 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 DNPH1O43598 174 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 RGS10O43665 173 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR10H3O60404 316 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A9O60656 530 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms