RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TCAIMQ8N3R3 496 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 LIX1Q8N485 282 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 WDR34Q96EX3 536 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 TBCDQ9BTW9 1192 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 ZNF703Q9H7S9 590 aaPredicted RBP16.16■□□□□ 0.18
TMEM53-209ENST00000495630 DMRT3Q9NQL9 472 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 SPACA6W5XKT8 324 aa16.16■□□□□ 0.18
TMEM53-209ENST00000495630 PGRMC1O00264 195 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 DYRK3O43781 588 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 ATE1O95260 518 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 IGKV3-11P04433 115 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 BMP5P22003 454 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 ATP5A1P25705 553 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 STT3AP46977 705 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 LAPTM5Q13571 262 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 KEAP1Q14145 624 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 FRG1Q14331 258 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 SF3B4Q15427 424 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 LYPD8Q6UX82 237 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 UBE3DQ7Z6J8 389 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 ZC3HC1Q86WB0 502 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 GAS2L3Q86XJ1 694 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 ACOT4Q8N9L9 421 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 TNIP2Q8NFZ5 429 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 ANKRD49Q8WVL7 239 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 SPACA9Q96E40 222 aaPredicted RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 PTCD3Q96EY7 689 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 RBM18Q96H35 190 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 MAPKAP1Q9BPZ7 522 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 CNOT10Q9H9A5 744 aaKnown RBP16.15■□□□□ 0.18
TMEM53-209ENST00000495630 PROK2Q9HC23 129 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 DNAJC11Q9NVH1 559 aa16.15■□□□□ 0.18
TMEM53-209ENST00000495630 TUBAL3A6NHL2 446 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 TAPBPO15533 448 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 PRAMEF4O60810 478 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 GOSR1O95249 250 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 IL2RAP01589 272 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 C1QAP02745 245 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 SERPINB3P29508 390 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 HOXC12P31275 282 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 ELK3P41970 407 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 TAS2R39P59534 338 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 IGLV3-21P80748 117 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-209ENST00000495630 DOC2AQ14183 400 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 TGFBIQ15582 683 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 HIST2H2ACQ16777 129 aaPredicted RBP16.14■□□□□ 0.17
TMEM53-209ENST00000495630 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 CDKL4Q5MAI5 379 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 PRAMEF9Q5VWM5 478 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 FBXW10Q5XX13 1052 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 STEAP4Q687X5 459 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 HIST2H2AA3Q6FI13 130 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 POMZP3Q6PJE2 187 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 LACC1Q8IV20 430 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 PDIK1LQ8N165 341 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 NAXEQ8NCW5 288 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 LRRC39Q96DD0 335 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 CFAP36Q96G28 342 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 VPS39Q96JC1 886 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 C18orf12Q96KH6 178 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 CAPZA3Q96KX2 299 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 ART5Q96L15 291 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 DGAT2Q96PD7 388 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 EFCAB11Q9BUY7 163 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 SLC6A15Q9H2J7 730 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM53-209ENST00000495630 ASIC3Q9UHC3 531 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 EML6Q6ZMW3 1958 aa16.14■□□□□ 0.17
TMEM53-209ENST00000495630 GOLGA6L10A0A0M3HER8 536 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 FAM95CA0A1B0GW59 222 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ANKRD33BA6NCL7 494 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 LRRC3CA6NJW4 275 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 SCELO95171 688 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ID2Q02363 134 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 MGAT5Q09328 741 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 AP5B1Q2VPB7 878 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ACSF3Q4G176 576 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-209ENST00000495630 PAGE2BQ5JRK9 111 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 HP1BP3Q5SSJ5 553 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-209ENST00000495630 PRAMEF20Q5VT98 475 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 SULT1C3Q6IMI6 304 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ADNP2Q6IQ32 1131 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ZNF793Q6ZN11 406 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 C9orf40Q8IXQ3 194 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 PM20D2Q8IYS1 436 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 WFDC11Q8NEX6 87 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 ACTRT1Q8TDG2 376 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 TIMP4Q99727 224 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 DERL2Q9GZP9 239 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 PLEKHF2Q9H8W4 249 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 POPDC3Q9HBV1 291 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 PSAT1Q9Y617 370 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 CHCHD2Q9Y6H1 151 aaPredicted RBP16.13■□□□□ 0.17
TMEM53-209ENST00000495630 TEX264Q9Y6I9 313 aa16.13■□□□□ 0.17
TMEM53-209ENST00000495630 FLNAP21333 2647 aaKnown RBP16.13■□□□□ 0.17
TMEM53-209ENST00000495630 NCF1BA6NI72 391 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-209ENST00000495630 NCF1CA8MVU1 366 aaPredicted RBP16.12■□□□□ 0.17
TMEM53-209ENST00000495630 STK16O75716 305 aa16.12■□□□□ 0.17
TMEM53-209ENST00000495630 FBXO45P0C2W1 286 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms