RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 TRIM55Q9BYV6 548 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 ING2Q9H160 280 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 ZNF395Q9H8N7 513 aaPredicted RBP10.87□□□□□ -0.67
CTSA-209ENST00000493522 WDR41Q9HAD4 459 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 ZNF160Q9HCG1 818 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 NECTIN3Q9NQS3 549 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 RIC8BQ9NVN3 520 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 TEX10Q9NXF1 929 aaPredicted RBP10.87□□□□□ -0.67
CTSA-209ENST00000493522 MS4A12Q9NXJ0 267 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 KCMF1Q9P0J7 381 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 ZDHHC2Q9UIJ5 367 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 RAP2CQ9Y3L5 183 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 DNAJC15Q9Y5T4 150 aa10.87□□□□□ -0.67
CTSA-209ENST00000493522 CENPEQ02224 2701 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 LOC102723996A0A087X1L8 192 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 IGHV1-45A0A0A0MS14 117 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 CYR61O00622 381 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 LDB3O75112 727 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 GUCY1B2O75343 617 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 MYO1DO94832 1006 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 SNUPNO95149 360 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 PDGFAP04085 211 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 FGF4P08620 206 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 LINC00032P0C843 101 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 ITGA3P26006 1051 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 OR4D2P58180 307 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 ID2Q02363 134 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 ACTN3Q08043 901 aaPredicted RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 STX4Q12846 297 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 PCOLCEQ15113 449 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 PDCD2Q16342 344 aaPredicted RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 GALNTL6Q49A17 601 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 HSP90B2PQ58FF3 399 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 IRAK1BP1Q5VVH5 260 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 ATG16L1Q676U5 607 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 OR52E8Q6IFG1 317 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 MRM1Q6IN84 353 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 PAPD4Q6PIY7 484 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 NDUFAF7Q7L592 441 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 TRIM46Q7Z4K8 759 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 SCUBE1Q8IWY4 988 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 HOMEZQ8IX15 550 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 OR2T11Q8NH01 316 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 RAB3IL1Q8TBN0 382 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 CHTF18Q8WVB6 975 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 SORT1Q99523 831 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 SLC25A23Q9BV35 468 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 ILKAPQ9H0C8 392 aaPredicted RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 ZNF700Q9H0M5 742 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 TUBB1Q9H4B7 451 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 RPF2Q9H7B2 306 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 MANSC1Q9H8J5 431 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 LRTM1Q9HBL6 345 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 MCM8Q9UJA3 840 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 POLR3HQ9Y535 204 aaPredicted RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 ASB4Q9Y574 426 aa10.86□□□□□ -0.67
CTSA-209ENST00000493522 PCDHGA9Q9Y5G4 932 aaKnown RBP10.86□□□□□ -0.67
CTSA-209ENST00000493522 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 MYOCOSA0A1B0GUC4 107 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 A0A1W2PQ72 361 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 A0A1W2PR48 441 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 TCRBV16S1A1N1A0A5B0 115 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 GLOD5A6NK44 160 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 A6NL46 340 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 A8MUA0 341 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 TGFBR3LH3BV60 316 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 PROM1O43490 865 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 FGF17O60258 216 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 SEC22BO75396 215 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 PPP2R1BP30154 601 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 ALDH9A1P49189 494 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 CCL11P51671 97 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 AIMP2Q13155 320 aaKnown RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 RAPSNQ13702 412 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 NDUFAF5Q5TEU4 345 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 RNF165Q6ZSG1 346 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 PARP9Q8IXQ6 854 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 KIRREL3Q8IZU9 778 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 LRRC8CQ8TDW0 803 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 LPAR4Q99677 370 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 TUBB6Q9BUF5 446 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 FAIM2Q9BWQ8 316 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 C20orf27Q9GZN8 174 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 ATP13A2Q9NQ11 1180 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 PNO1Q9NRX1 252 aaKnown RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 INTS9Q9NV88 658 aaKnown RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 C1orf109Q9NX04 203 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 G3BP2Q9UN86 482 aaKnown RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.85□□□□□ -0.67
CTSA-209ENST00000493522 CREBBPQ92793 2442 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 EXPH5Q8NEV8 1989 aa10.85□□□□□ -0.67
CTSA-209ENST00000493522 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
CTSA-209ENST00000493522 SYNDIG1LA6NDD5 238 aa10.84□□□□□ -0.67
CTSA-209ENST00000493522 CTNSO60931 367 aa10.84□□□□□ -0.67
CTSA-209ENST00000493522 SORBS2O94875 1100 aaKnown RBP10.84□□□□□ -0.67
CTSA-209ENST00000493522 IFNA16P05015 189 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms