RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PADI2Q9Y2J8 665 aa17.52■□□□□ 0.4
MCF2L-230ENST00000491028 C21orf140B9A014 251 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 SEC16AO15027 2179 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 FGF17O60258 216 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 JRKO75564 520 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 CDC123O75794 336 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-230ENST00000491028 ADRB1P08588 477 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 LIPCP11150 499 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 S100A3P33764 101 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 IGLV3-21P80748 117 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-230ENST00000491028 FOLH1Q04609 750 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 SLC13A2Q13183 592 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 BIKQ13323 160 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 ERV3-1Q14264 604 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 TERF2Q15554 542 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 CEBPEQ15744 281 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 MINDY4Q4G0A6 757 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 SPANXN4Q5MJ08 99 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 MFSD4BQ5TF39 518 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 BLOC1S3Q6QNY0 202 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 MSANTD1Q6ZTZ1 278 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 DTX1Q86Y01 620 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 CT55Q8WUE5 264 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 UCN3Q969E3 161 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 EXOSC8Q96B26 276 aaKnown RBP17.51■□□□□ 0.39
MCF2L-230ENST00000491028 DUSP26Q9BV47 211 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 SLC35C2Q9NQQ7 365 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 ZNF780BQ9Y6R6 833 aa17.51■□□□□ 0.39
MCF2L-230ENST00000491028 NR5A2O00482 541 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 CFLARO15519 480 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 PDPK1O15530 556 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 CNOT3O75175 753 aaKnown RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 ERAL1O75616 437 aaKnown RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 GPR75O95800 540 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 PGRP06401 933 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 SNRPB2P08579 225 aaKnown RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 LAMP1P11279 417 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 TCN2P20062 427 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 SPINK2P20155 84 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 PRDX6P30041 224 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 NTSP30990 170 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 RHAGQ02094 409 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 LRRC74AQ0VAA2 488 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 SERTAD2Q14140 314 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 PGS1Q32NB8 556 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 ANKRD26P1Q6NSI1 321 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 GK5Q6ZS86 529 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 FITM2Q8N6M3 262 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 PLPP5Q8NEB5 264 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 ANKRD9Q96BM1 317 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 SPDL1Q96EA4 605 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 SLC25A23Q9BV35 468 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 GPR87Q9BY21 358 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 VN1R1Q9GZP7 353 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 FAM120CQ9NX05 1096 aaKnown RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-230ENST00000491028 C5AR2Q9P296 337 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 MKL2Q9ULH7 1088 aa17.5■□□□□ 0.39
MCF2L-230ENST00000491028 CCDC154A6NI56 674 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 CAPN14A8MX76 684 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 IDSB3KWA1 339 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 C9JVG2 144 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 RNASET2O00584 256 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 PCDH17O14917 1159 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 LDB3O75112 727 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 FRKP42685 505 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 RPS15P62841 145 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 STX4Q12846 297 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 DNASE1L3Q13609 305 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 TIGD2Q4W5G0 525 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 ANXA8L1Q5VT79 327 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 OR4F3Q6IEY1 312 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 TRPM8Q7Z2W7 1104 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 PRSS58Q8IYP2 241 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 ENDOVQ8N8Q3 282 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 VPS37AQ8NEZ2 397 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 OR2Y1Q8NGV0 311 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 ZFP28Q8NHY6 868 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 RP9Q8TA86 221 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 NKD1Q969G9 470 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 CNRIP1Q96F85 164 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 PTCHD1Q96NR3 888 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 PELOQ9BRX2 385 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 SOX17Q9H6I2 414 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 ACSS1Q9NUB1 689 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 CROTQ9UKG9 612 aa17.49■□□□□ 0.39
MCF2L-230ENST00000491028 FARSAQ9Y285 508 aaKnown RBP17.49■□□□□ 0.39
MCF2L-230ENST00000491028 IGKV3D-11A0A0A0MRZ8 115 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 A0A1W2PP18 115 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 WASHC1A8K0Z3 465 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 BBIP1A8MTZ0 92 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 MYO1GB0I1T2 1018 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 TERTO14746 1132 aaKnown RBP17.48■□□□□ 0.39
MCF2L-230ENST00000491028 RECKO95980 971 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 HEXBP07686 556 aa17.48■□□□□ 0.39
MCF2L-230ENST00000491028 PORP16435 677 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-230ENST00000491028 CSNK2A2P19784 350 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms