RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 IL16Q14005 1332 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CENPJQ9HC77 1338 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 BRD4O60885 1362 aaPredicted RBP3.11□□□□□ -1.91
PRPF4-203ENST00000488937 CARMIL1Q5VZK9 1371 aa3.11□□□□□ -1.91
PRPF4-203ENST00000488937 A0A087WUV0 522 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 A0A0J9YYE9 177 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 LOC100506127A0A0U1RQW1 187 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 METTL21EPA6NDL7 271 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 GOLGA6L9A6NEM1 432 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 PCP4L1A6NKN8 68 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 C2CD4DB7Z1M9 353 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 I6L893 689 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 HAS3O00219 553 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 BTN3A3O00478 584 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CLDN5O00501 218 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 NBR2O15453 112 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 RRP8O43159 456 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR1F1O43749 312 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SERPINI2O75830 405 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 DFFBO76075 338 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 FGFR1OPO95684 399 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TXNDC12O95881 172 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TRBC1P01850 177 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ALPIP09923 528 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 DBTP11182 482 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SRMP19623 302 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TPSB2P20231 275 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TUBG1P23258 451 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR3A3P47888 321 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 RAB9AP51151 201 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 NR0B1P51843 470 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 KCNK10P57789 538 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CD81P60033 236 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 RPS15P62841 145 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 HSF1Q00613 529 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 MYBPHQ13203 477 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 NME3Q13232 169 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CDH18Q13634 790 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 FHL1Q13642 323 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 EXOSC7Q15024 291 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SPHARQ15513 63 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TPSAB1Q15661 275 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 DUSP6Q16828 381 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 Q3ZCU0 254 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 MIDNQ504T8 468 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 HIKESHIQ53FT3 197 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 C20orf194Q5TEA3 1177 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM220Q6QAJ8 160 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 DEGS2Q6QHC5 323 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CENPUQ71F23 418 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 PRUNE1Q86TP1 453 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 GPSM1Q86YR5 675 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CCDC36Q8IYA8 594 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF444Q8N0Y2 327 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SMYD1Q8NB12 490 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 PPFIBP2Q8ND30 876 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR4C5Q8NGB2 326 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR5AU1Q8NGC0 362 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR10Q1Q8NGQ4 319 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR13J1Q8NGT2 312 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR4L1Q8NH43 312 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR52I2Q8NH67 350 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 RNF128Q8TEB7 428 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 WFIKKN2Q8TEU8 576 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 MITD1Q8WV92 249 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TRIB2Q92519 343 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SARAFQ96BY9 339 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 RITA1Q96K30 269 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 MARK4Q96L34 752 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 VSTM2LQ96N03 204 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 S1PR3Q99500 378 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 MAP3K3Q99759 626 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TDRD1Q9BXT4 1180 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ROPN1BQ9BZX4 212 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TRIM9Q9C026 710 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 IQCGQ9H095 443 aaKnown RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SDCBP2Q9H190 292 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 FAM124BQ9H5Z6 455 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ELOVL3Q9HB03 270 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TUBG2Q9NRH3 451 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM51Q9NW97 253 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 QPCTLQ9NXS2 382 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 WWOXQ9NZC7 414 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 OR6C2Q9NZP2 312 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 DBF4Q9UBU7 674 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SEC14L3Q9UDX4 400 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF639Q9UID6 485 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 CDH9Q9ULB4 789 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 PIGLQ9Y2B2 252 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SLC9A8Q9Y2E8 581 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 C15orf41Q9Y2V0 281 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 YIPF1Q9Y548 306 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 SPIN1Q9Y657 262 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 V9GYY5 206 aaPredicted RBP3.1□□□□□ -1.91
PRPF4-203ENST00000488937 ATP10DQ9P241 1426 aa3.1□□□□□ -1.91
PRPF4-203ENST00000488937 TRBV5-3A0A0A0MS03 114 aa3.09□□□□□ -1.91
PRPF4-203ENST00000488937 A0A0G2JK05 382 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms