RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SCN1BQ07699 218 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 LRRC73Q5JTD7 316 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 C1QTNF12Q5T7M4 302 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 AGAP6Q5VW22 663 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 SHEQ5VZ18 495 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 CROCCP3Q8IVE0 287 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 TIGD4Q8IY51 512 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 TDHQ8IZJ6 230 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 SIX6OS1Q8N1H7 587 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 HEXDCQ8WVB3 486 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 RNF138Q8WVD3 245 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 MR1Q95460 341 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 ST6GALNAC6Q969X2 333 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 ERO1AQ96HE7 468 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 CDHR1Q96JP9 859 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 PRMT1Q99873 361 aaKnown RBP2.43□□□□□ -2.02
GCFC2-209ENST00000486016 EBF4Q9BQW3 602 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 INPP5KQ9BT40 448 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 NT5DC2Q9H857 520 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 AMBNQ9NP70 447 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 RCOR3Q9P2K3 495 aaPredicted RBP2.43□□□□□ -2.02
GCFC2-209ENST00000486016 NOL7Q9UMY1 257 aaKnown RBP2.43□□□□□ -2.02
GCFC2-209ENST00000486016 RNF24Q9Y225 148 aa2.43□□□□□ -2.02
GCFC2-209ENST00000486016 A0A0B4J203 849 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 C5orf52A6NGY3 159 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 SLC7A4O43246 635 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 HSP90AB1P08238 724 aaKnown RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 VIMP08670 466 aaKnown RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 SP9P0CG40 484 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 FOSL2P15408 326 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 LBPP18428 481 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 CASTP20810 708 aaKnown RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 PSMB4P28070 264 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 HMGCLP35914 325 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 SLC1A3P43003 542 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 ALDH3B1P43353 468 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 TNNT3P45378 269 aaPredicted RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 GPR50Q13585 617 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 PTK6Q13882 451 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 TMEM182Q6ZP80 229 aaPredicted RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 NLRP14Q86W24 1093 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 SAMD12Q8N8I0 201 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 TBCKQ8TEA7 893 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 CORO2AQ92828 525 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 EXOC4Q96A65 974 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 FAF2Q96CS3 445 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 BPIFA2Q96DR5 249 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 CCDC114Q96M63 670 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 AK8Q96MA6 479 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 JAKMIP1Q96N16 626 aaKnown RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 IKZF5Q9H5V7 419 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 LMAN1LQ9HAT1 526 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 TMEM9Q9P0T7 183 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 NOCTQ9UK39 431 aaKnown RBP2.42□□□□□ -2.02
GCFC2-209ENST00000486016 SH3GLB1Q9Y371 365 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 PCDHGA1Q9Y5H4 931 aa2.42□□□□□ -2.02
GCFC2-209ENST00000486016 ACSL4O60488 711 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 FCGR3BO75015 233 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 PGLSO95336 258 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 SLU7O95391 586 aaKnown RBP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 TGDSO95455 350 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 MUTP22033 750 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 TIA1P31483 386 aaKnown RBP eCLIP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 OR3A1P47881 315 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 FNTAP49354 379 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 FHITP49789 147 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 RPP38P78345 283 aaKnown RBP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 KRT83P78385 493 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 CELF3Q5SZQ8 465 aaKnown RBP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 FAM46CQ5VWP2 391 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 TXNRD3NBQ6F5E7 133 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 Q6P435 159 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 MSANTD1Q6ZTZ1 278 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 CACUL1Q86Y37 369 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 TMEM99Q8N816 258 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 ATP6V1E2Q96A05 226 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 DESI2Q9BSY9 194 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 MLPHQ9BV36 600 aaPredicted RBP2.41□□□□□ -2.02
GCFC2-209ENST00000486016 NACAP1Q9BZK3 213 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 RAB9BQ9NP90 201 aa2.41□□□□□ -2.02
GCFC2-209ENST00000486016 CDC42BPBQ9Y5S2 1711 aa2.4□□□□□ -2.02
GCFC2-209ENST00000486016 FAM170AA1A519 330 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 ZFP92A6NM28 416 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 CCER2I3L3R5 266 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 PSMA7O14818 248 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 IFIT3O14879 490 aaKnown RBP2.4□□□□□ -2.03
GCFC2-209ENST00000486016 MCF2LO15068 1137 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 PPIP5K2O43314 1243 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 ZNF861PO60384 105 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 SELENOFO60613 162 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 ANKRD34CP0C6C1 535 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 CTNNA1P35221 906 aaKnown RBP2.4□□□□□ -2.03
GCFC2-209ENST00000486016 WNT4P56705 351 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 STX17P56962 302 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 LCP2Q13094 533 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 CDO1Q16878 200 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 TWISTNBQ3B726 338 aaPredicted RBP2.4□□□□□ -2.03
GCFC2-209ENST00000486016 NHSL2Q5HYW2 709 aa2.4□□□□□ -2.03
GCFC2-209ENST00000486016 WDR25Q64LD2 544 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms