RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PRKCAP17252 672 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 MAPK8P45983 427 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 LRRC32Q14392 662 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 KRT33BQ14525 404 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 LARS2Q15031 903 aaKnown RBP12.12□□□□□ -0.47
VPS52-218ENST00000482399 ZNF791Q3KP31 576 aaPredicted RBP12.12□□□□□ -0.47
VPS52-218ENST00000482399 OR7G1Q8NGA0 311 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 OR8J2Q8NGG1 315 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 DOK4Q8TEW6 326 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 SCRN2Q96FV2 425 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ZFP3Q96NJ6 502 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ZDHHC4Q9NPG8 344 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 STUB1Q9UNE7 303 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 Q9Y3F1 56 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 SPEF1Q9Y4P9 236 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 HPGDSO60760 199 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ATG13O75143 517 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ELFN1P0C7U0 828 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 CBSLP0DN79 551 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 CBSP35520 551 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 MAP2K3P46734 347 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 SPINT3P49223 89 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 CCT3P49368 545 aaKnown RBP12.12□□□□□ -0.47
VPS52-218ENST00000482399 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS52-218ENST00000482399 LIPJQ5W064 366 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 RAET1GQ6H3X3 334 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 REEP3Q6NUK4 255 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 IL20RBQ6UXL0 311 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 RFPL4BQ6ZWI9 263 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 OR52E4Q8NGH9 312 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 OR52P1PQ8NH57 321 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 FCRL4Q96PJ5 515 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 TRMT61BQ9BVS5 477 aaKnown RBP12.12□□□□□ -0.47
VPS52-218ENST00000482399 BARHL1Q9BZE3 327 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 HHATLQ9HCP6 504 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 MRPL17Q9NRX2 175 aaKnown RBP12.12□□□□□ -0.47
VPS52-218ENST00000482399 MARCH5Q9NX47 278 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 MAPRE3Q9UPY8 281 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 KLK4Q9Y5K2 254 aa12.12□□□□□ -0.47
VPS52-218ENST00000482399 ARID1AO14497 2285 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 A0A1W2PPK0 400 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 UNCXA6NJT0 531 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 ANHXE9PGG2 379 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 INPPL1O15357 1258 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 MPZL2O60487 215 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 PPP2R1BP30154 601 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 TALDO1P37837 337 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 DGKGP49619 791 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 POLR2LP62875 67 aaKnown RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 CNIH2Q6PI25 160 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 CCDC190Q86UF4 302 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SLC30A8Q8IWU4 369 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SLC7A6Q92536 515 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 CLIP3Q96DZ5 547 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 ST6GAL2Q96JF0 529 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 QRSL1Q9H0R6 528 aaKnown RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 WASHC1A8K0Z3 465 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 FZD6O60353 706 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SCN2BO60939 215 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SERPINI2O75830 405 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SEMA3DO95025 777 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 RPS25P62851 125 aaKnown RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 INSL4Q14641 139 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 BRAT1Q6PJG6 821 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 WASH2PQ6VEQ5 465 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 VWA5B2Q8N398 1253 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 L3MBTL4Q8NA19 623 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 TEX47Q8TBZ9 253 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 PIGKQ92643 395 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 SNX18Q96RF0 628 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 MACROD1Q9BQ69 325 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 GABARAPL3Q9BY60 117 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 ABCG4Q9H172 646 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 PADI2Q9Y2J8 665 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 FEZF1A0PJY2 475 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 VNN2O95498 520 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 GPLD1P80108 840 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 COX10Q12887 443 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 C22orf39Q6P5X5 142 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 BCL7CQ8WUZ0 217 aaPredicted RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 DHRS1Q96LJ7 313 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
VPS52-218ENST00000482399 NRTNQ99748 197 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
VPS52-218ENST00000482399 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms