RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 EXOC6BQ9Y2D4 811 aa0.18□□□□□ -2.38
CALD1-218ENST00000478075 TDRD9Q8NDG6 1382 aaKnown RBP0.18□□□□□ -2.38
CALD1-218ENST00000478075 CABIN1Q9Y6J0 2220 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 USP27XA6NNY8 438 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 B4DLN1 442 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 TRIM77I1YAP6 450 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ABCD4O14678 606 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 IMPA2O14732 288 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ADAMDEC1O15204 470 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PLOD3O60568 738 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 BBOX1O75936 387 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 TGDSO95455 350 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PYGLP06737 847 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 FHP07954 510 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ACVR1BP36896 505 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 HSD17B3P37058 310 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 MNAT1P51948 309 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 MRPL12P52815 198 aaKnown RBP0.17□□□□□ -2.38
CALD1-218ENST00000478075 NUP107P57740 925 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 GIT2Q14161 759 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 SNAPC1Q16533 368 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ODF2Q5BJF6 829 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ZNF311Q5JNZ3 666 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 RAB41Q5JT25 222 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 SUSD4Q5VX71 490 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PLPP4Q5VZY2 271 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 RFPL4BQ6ZWI9 263 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PIGWQ7Z7B1 504 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PYCR2Q96C36 320 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 GDAP1L1Q96MZ0 367 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 ITPAQ9BY32 194 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 FTOQ9C0B1 505 aaKnown RBP eCLIP0.17□□□□□ -2.382e-6■□□□□ 9.7
CALD1-218ENST00000478075 UBA5Q9GZZ9 404 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 OR51J1Q9H342 316 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 PHPT1Q9NRX4 125 aaPredicted RBP0.17□□□□□ -2.38
CALD1-218ENST00000478075 PDP2Q9P2J9 529 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 DDX25Q9UHL0 483 aaKnown RBP0.17□□□□□ -2.38
CALD1-218ENST00000478075 OPN4Q9UHM6 478 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 TBX21Q9UL17 535 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 SLCO1B1Q9Y6L6 691 aa0.17□□□□□ -2.38
CALD1-218ENST00000478075 FLG2Q5D862 2391 aaPredicted RBP0.16□□□□□ -2.38
CALD1-218ENST00000478075 COLCA2A8K830 154 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 WWP2O00308 870 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 PSMD3O43242 534 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 SCGB1D1O95968 90 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 SP9P0CG40 484 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 RNH1P13489 461 aaKnown RBP0.16□□□□□ -2.38
CALD1-218ENST00000478075 MYL6BP14649 208 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 ARHGDIBP52566 201 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 MFAP2P55001 183 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 TIMM10P62072 90 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 MAMLD1Q13495 774 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 PPA1Q15181 289 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 EOGTQ5NDL2 527 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.16□□□□□ -2.38
CALD1-218ENST00000478075 FAM219BQ5XKK7 198 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 WDR25Q64LD2 544 aaPredicted RBP0.16□□□□□ -2.38
CALD1-218ENST00000478075 SLC27A4Q6P1M0 643 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 KBTBD6Q86V97 674 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 LAX1Q8IWV1 398 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 SLC43A2Q8N370 569 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 CFAP61Q8NHU2 1237 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 SMPDL3AQ92484 453 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 C7orf26Q96N11 449 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 NICN1Q9BSH3 213 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 ULBP2Q9BZM5 246 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 Q9H3A6 140 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 SMARCAD1Q9H4L7 1026 aa0.16□□□□□ -2.38
CALD1-218ENST00000478075 COL5A3P25940 1745 aaPredicted RBP0.16□□□□□ -2.38
CALD1-218ENST00000478075 SHANK1Q9Y566 2161 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 A0A096LNJ9 63 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 A0A1W2PPM1 405 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 LRRD1A4D1F6 860 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 NKX2-6A6NCS4 301 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 TRABD2BA6NFA1 517 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 P2RX6O15547 441 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 RIPK2O43353 540 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 HTATSF1O43719 755 aaKnown RBP0.15□□□□□ -2.39
CALD1-218ENST00000478075 IGHV3-9P01782 118 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 MMP1P03956 469 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 IGHV4-34P06331 123 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 RETP07949 1114 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 MRPL3P09001 348 aaKnown RBP0.15□□□□□ -2.39
CALD1-218ENST00000478075 MMP10P09238 476 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 CYP11B1P15538 503 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 EPORP19235 508 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 HOXD10P28358 340 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 UGT1A3P35503 534 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 TFPI2P48307 235 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 KRTAP12-1P59990 96 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 SULT2A1Q06520 285 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 GGTLC2Q14390 218 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 EMC2Q15006 297 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 TAF9Q16594 264 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 ZNF630Q2M218 657 aaPredicted RBP0.15□□□□□ -2.39
CALD1-218ENST00000478075 GLYR1Q49A26 553 aaPredicted RBP0.15□□□□□ -2.39
CALD1-218ENST00000478075 SULT1C3Q6IMI6 304 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 LINC00336Q6ZUF6 198 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 AMIGO1Q86WK6 493 aa0.15□□□□□ -2.39
CALD1-218ENST00000478075 ELMOD1Q8N336 334 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms