RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 MEI4A8MW99 385 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PSMD12O00232 456 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 UBDO15205 165 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SLC22A1O15245 554 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 TPD52L2O43399 206 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZBTB14O43829 449 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PIP5K1CO60331 668 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 NBNO60934 754 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 GPC4O75487 556 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 OR6B1O95007 311 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CPNE6O95741 557 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 HPRP00739 348 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 F9P00740 461 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 TK1P04183 234 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 C2P06681 752 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 FGF4P08620 206 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 OCM2P0CE71 109 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 OCMP0CE72 109 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ETS2P15036 469 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 XRCC1P18887 633 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CCNA2P20248 432 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SERPINB10P48595 397 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 HLCSP50747 726 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 BCAP31P51572 246 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CDH8P55286 799 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 GABARAPL2P60520 117 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 STX1BP61266 288 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 MS4A2Q01362 244 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 RELAQ04206 551 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CDH17Q12864 832 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 MERTKQ12866 999 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 IL18R1Q13478 541 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CEACAM7Q14002 265 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZNF846Q147U1 533 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SF3B4Q15427 424 aaKnown RBP eCLIP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 KCTD19Q17RG1 926 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 MRGPRG-AS1Q2M3A8 158 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 RGS21Q2M5E4 152 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SLC25A52Q3SY17 297 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SLC36A3Q495N2 470 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SLC9B1Q4ZJI4 515 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 MDH1BQ5I0G3 518 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 GLRA4Q5JXX5 417 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CCNYL2Q5T2Q4 361 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CES4AQ5XG92 561 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 TWF2Q6IBS0 349 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 LCN8Q6JVE9 175 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 RETSATQ6NUM9 610 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 C16orf87Q6PH81 154 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZCCHC23Q6ZST2 131 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 FAM43BQ6ZT52 329 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 EFL1Q7Z2Z2 1120 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 MOGAT3Q86VF5 341 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 GALNT13Q8IUC8 556 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CRYBG2Q8N1P7 616 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SFRP1Q8N474 314 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 DCLK2Q8N568 766 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 DHRSXQ8N5I4 330 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 LRRC52Q8N7C0 313 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZNF781Q8N8C0 355 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SNX31Q8N9S9 440 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PAPD5Q8NDF8 572 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 KLHDC9Q8NEP7 349 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 TRPV3Q8NET8 790 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 GIPC3Q8TF64 312 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PEX13Q92968 403 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ABTB1Q969K4 478 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 NT5C3BQ969T7 300 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ATP6V1E2Q96A05 226 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 NTAN1Q96AB6 310 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 C18orf25Q96B23 403 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ISOC1Q96CN7 298 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 AURKBQ96GD4 344 aaPredicted RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 HPDLQ96IR7 371 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PLEKHA8Q96JA3 519 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ZMAT2Q96NC0 199 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CSPG4P5Q96PW8 444 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PEBP4Q96S96 227 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PKP2Q99959 881 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 SNRNP25Q9BV90 132 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 KIFC1Q9BW19 673 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CTDSP1Q9GZU7 261 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 NXF3Q9H4D5 531 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 COQ10BQ9H8M1 238 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 CXorf21Q9HAI6 301 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 HMG20AQ9NP66 347 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 INTS10Q9NVR2 710 aaKnown RBP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.34□□□□□ -1.71
LMBR1-216ENST00000477983 ABCD2Q9UBJ2 740 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 PSME2Q9UL46 239 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 VANGL2Q9ULK5 521 aa4.34□□□□□ -1.71
LMBR1-216ENST00000477983 RNF103-CHMP3A0A140T963 221 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 SMIM28A0A1B0GU29 152 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 ZCWPW2A0A1B0GU75 182 aa4.33□□□□□ -1.72
LMBR1-216ENST00000477983 FUOMA2VDF0 154 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms