RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 EIF2S3LQ2VIR3 472 aaKnown RBP16.48■□□□□ 0.23
PTPN7-209ENST00000477554 TTC19Q6DKK2 380 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-209ENST00000477554 NIPAL1Q6NVV3 410 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 GRHL3Q8TE85 626 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 HAS2Q92819 552 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 UBE2E3Q969T4 207 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 ATP6V1E2Q96A05 226 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 TBCDQ9BTW9 1192 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 NTMT1Q9BV86 223 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 CDCP1Q9H5V8 836 aa16.48■□□□□ 0.23
PTPN7-209ENST00000477554 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
PTPN7-209ENST00000477554 CLEC18AA5D8T8 446 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 GLOD5A6NK44 160 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 SEMA7AO75326 666 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 OR4F21O95013 312 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 OTCP00480 354 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 ICAM2P13598 275 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 PIK3CBP42338 1070 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 GPR143P51810 404 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 TUBA3CQ13748 450 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 EXT1Q16394 746 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 TMEM35AQ53FP2 167 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 ABHD17BQ5VST6 288 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 TUBA3EQ6PEY2 450 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 CLEC18BQ6UXF7 455 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF227Q86WZ6 799 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 HOMEZQ8IX15 550 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 KIRREL3Q8IZU9 778 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 EFCAB3Q8N7B9 438 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 CLEC18CQ8NCF0 446 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 MMACHCQ9Y4U1 282 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 PCDHGA11Q9Y5H2 935 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 COPG1Q9Y678 874 aaKnown RBP16.47■□□□□ 0.23
PTPN7-209ENST00000477554 NBPF19A0A087WUL8 3843 aa16.47■□□□□ 0.23
PTPN7-209ENST00000477554 A0A0A6YYD5 115 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TMEM200CA6NKL6 621 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 CYSRT1A8MQ03 144 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 HRKO00198 91 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 UGDHO60701 494 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 CBX6O95503 412 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 CD96P40200 585 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TSFMP43897 325 aaKnown RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 HSD17B7P56937 341 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 GNGT1P63211 74 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TLR1Q15399 786 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 ARL13AQ5H913 290 aaPredicted RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 SPINK14Q6IE38 97 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 MRM1Q6IN84 353 aaKnown RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 CHSY3Q70JA7 882 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 MILR1Q7Z6M3 343 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 MMP21Q8N119 569 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 PTPMT1Q8WUK0 201 aaPredicted RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 NCLNQ969V3 563 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 RGMAQ96B86 450 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 ZNF382Q96SR6 550 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 MRPL1Q9BYD6 325 aaKnown RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 ALOXE3Q9BYJ1 711 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 LYRM4Q9HD34 91 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TNFRSF12AQ9NP84 129 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TSC22D4Q9Y3Q8 395 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 ASB4Q9Y574 426 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 HECTD1Q9ULT8 2610 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 DOPEY2Q9Y3R5 2298 aa16.46■□□□□ 0.23
PTPN7-209ENST00000477554 TRBV11-1A0A0K0K1C0 115 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 A0A1W2PR48 441 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 DYTNA2CJ06 578 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 OR5H15A6NDH6 313 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 UBFD1O14562 309 aaKnown RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 ITM2AO43736 263 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 KLHL41O60662 606 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 VPS4BO75351 444 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 PDYNP01213 254 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 VIMP08670 466 aaKnown RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CPN2P22792 545 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 TPP2P29144 1249 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 LSP1P33241 339 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 HTR6P50406 440 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 RAP1GDS1P52306 607 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 PKNOX1P55347 436 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 OCRLQ01968 901 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 ESPL1Q14674 2120 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 CES4AQ5XG92 561 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 ZNF595Q8IYB9 648 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 GALNT11Q8NCW6 608 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 MDS2Q8NDY4 140 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 C7orf26Q96N11 449 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 FRG2BQ96QU4 278 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 KCNA7Q96RP8 456 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 TEX10Q9NXF1 929 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 VPS4AQ9UN37 437 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 RAP2CQ9Y3L5 183 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 FLNBO75369 2602 aaKnown RBP16.45■□□□□ 0.22
PTPN7-209ENST00000477554 SVILO95425 2214 aa16.45■□□□□ 0.22
PTPN7-209ENST00000477554 RP1L1Q8IWN7 2480 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms