RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 AKTIPQ9H8T0 292 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 NECTIN3Q9NQS3 549 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 C1orf109Q9NX04 203 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MCM8Q9UJA3 840 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 C3orf18Q9UK00 162 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 KCND3Q9UK17 655 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 FBXW2Q9UKT8 454 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 CES1P1Q9UKY3 287 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 MKL2Q9ULH7 1088 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 ADGRG4Q8IZF6 3080 aa6.56□□□□□ -1.36
LIMD1-204ENST00000474665 EML6Q6ZMW3 1958 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 NINQ8N4C6 2090 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 LOC102723996A0A087X1L8 192 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 IGHV3-20A0A0C4DH32 117 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 TCP11X1B4DZS4 312 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 HDAC3O15379 428 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 FGF17O60258 216 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 LDB3O75112 727 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 PEX11AO75192 247 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ALOX12BO75342 701 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CRCPO75575 148 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 SNUPNO95149 360 aaKnown RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 PRKAR1AP10644 381 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 KITP10721 976 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 NEFHP12036 1026 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 COX6A1P12074 109 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 BCKDHAP12694 445 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 HOXB4P17483 251 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 SDC1P18827 310 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 IL10P22301 178 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 TIA1P31483 386 aaKnown RBP eCLIP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 OTX2P32243 289 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 MDH1P40925 334 aaKnown RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 FOLR3P41439 243 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 EMP2P54851 167 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 DIO3P55073 304 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 IGLV3-21P80748 117 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 MC1RQ01726 317 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 TNFRSF17Q02223 184 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ID2Q02363 134 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 OCA2Q04671 838 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 DUSP2Q05923 314 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ACSM2AQ08AH3 577 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 Q0VFX4 171 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CDC20Q12834 499 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 KCNAB2Q13303 367 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ATP1A4Q13733 1029 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 SSPNQ14714 243 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF750Q32MQ0 723 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 SLC9B1Q4ZJI4 515 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 HSP90B2PQ58FF3 399 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 SPDYAQ5MJ70 313 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CCNYL2Q5T2Q4 361 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ATG16L1Q676U5 607 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ACSM2BQ68CK6 577 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 FAAH2Q6GMR7 532 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 FAM71E1Q6IPT2 247 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CGB2Q6NT52 195 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 NIPAL1Q6NVV3 410 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 NOXRED1Q6NXP6 359 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 DGAT2L6Q6ZPD8 337 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 QSOX2Q6ZRP7 698 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 FAM47EQ6ZV65 393 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 OR4N5Q8IXE1 308 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 DDIASQ8IXT1 998 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 OR11G2Q8NGC1 345 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 LRRC8CQ8TDW0 803 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 C16orf78Q8WTQ4 265 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 KIAA1143Q96AT1 154 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 C19orf60Q96EN9 201 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ZNF317Q96PQ6 595 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 OR52B2Q96RD2 323 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CRB3Q9BUF7 120 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ROGDIQ9GZN7 287 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ADNPQ9H2P0 1102 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 CCDC134Q9H6E4 229 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 WDR55Q9H6Y2 383 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 COPS7BQ9H9Q2 264 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 MEAF6Q9HAF1 191 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 KCNK13Q9HB14 408 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 LRTM1Q9HBL6 345 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 C14orf105Q9NVL8 296 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 AHSPQ9NZD4 102 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 C5AR2Q9P296 337 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 BAIAP2L1Q9UHR4 511 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 GPN3Q9UHW5 284 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 NXT1Q9UKK6 140 aaKnown RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 ITGB1BP2Q9UKP3 347 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 POLR3HQ9Y535 204 aaPredicted RBP6.55□□□□□ -1.36
LIMD1-204ENST00000474665 POLEQ07864 2286 aa6.55□□□□□ -1.36
LIMD1-204ENST00000474665 PDZD2O15018 2839 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 DNAJC13O75165 2243 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 CPAMD8Q8IZJ3 1885 aa6.54□□□□□ -1.36
LIMD1-204ENST00000474665 ABCA2Q9BZC7 2435 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms