RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	SLC31A1	O15431	190 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SLC7A4	O43246	635 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LDB2	O43679	373 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	DUX1	O43812	170 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SNAP91	O60641	907 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SKAP2	O75563	359 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SORBS2	O94875	1100 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NADK	O95544	446 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NDST3	O95803	873 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	BAG2	O95816	211 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	KLKB1	P03952	638 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	FGF1	P05230	155 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LIF	P15018	202 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TSPAN8	P19075	237 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TFEB	P19484	476 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	HLA-DPA1	P20036	260 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PRDX6	P30041	224 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CPOX	P36551	454 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	VHL	P40337	213 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	ETV5	P41161	510 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LEPR	P48357	1165 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PTDSS1	P48651	473 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CCR5	P51681	352 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CLCN2	P51788	898 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CDH4	P55283	916 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SLC34A1	Q06495	639 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SRSF4	Q08170	494 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TBL3	Q12788	808 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	MSLN	Q13421	630 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	RAB32	Q13637	225 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SEMA3A	Q14563	771 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CST6	Q15828	149 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	FAM83E	Q2M2I3	478 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	DEFB109B	Q30KR1	87 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TRMT5	Q32P41	509 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PLA1A	Q53H76	456 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TECRL	Q5HYJ1	363 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SH2D4B	Q5SQS7	431 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	ATP1A1-AS1	Q5TC04	95 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	KLC3	Q6P597	504 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LINGO4	Q6UY18	593 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LRRC74B	Q6ZQY2	392 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	LCA5	Q86VQ0	697 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	MCEMP1	Q8IX19	187 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	DEFB107A	Q8IZN7	70 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	KIRREL3	Q8IZU9	778 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	BBS5	Q8N3I7	341 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CARNMT1	Q8N4J0	409 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	AADAT	Q8N5Z0	425 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	OR2C3	Q8N628	320 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SCARB1	Q8WTV0	552 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	ANKRD49	Q8WVL7	239 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	DDB2	Q92466	427 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TADA1	Q96BN2	335 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CCDC124	Q96CT7	223 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CMTM5	Q96DZ9	223 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PHF21B	Q96EK2	531 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NSMCE3	Q96MG7	304 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PANX3	Q96QZ0	392 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	WDR12	Q9GZL7	423 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	MAGEH1	Q9H213	219 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	TMEM245	Q9H330	911 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	ALG9	Q9H6U8	611 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	DCLRE1B	Q9H816	532 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	PDF	Q9HBH1	243 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NMRK1	Q9NWW6	199 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	NCKIPSD	Q9NZQ3	722 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	SLC7A8	Q9UHI5	535 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	AGO1	Q9UL18	857 aa	Known RBP	4.98	□□□□□ -1.61
FN1-219	ENST00000474036	CRYL1	Q9Y2S2	319 aa		4.98	□□□□□ -1.61
FN1-219	ENST00000474036	AKAP9	Q99996	3911 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036		A0A0U1RQS6	177 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	ISM1	B1AKI9	464 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	SUPT3H	B4E1H0	165 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036		F8W8V4	182 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	SDHD	O14521	159 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	CD3EAP	O15446	510 aa	Known RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	CFLAR	O15519	480 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	NKX2-8	O15522	239 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	KDELR3	O43731	214 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	CCNT2	O60583	730 aa	Known RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	TBL1X	O60907	577 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	SMIM24	O75264	130 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	PROP1	O75360	226 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	SUPT3H	O75486	399 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	CLDN11	O75508	207 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	TMCC1	O94876	653 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	DDAH2	O95865	285 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	PENK	P01210	267 aa	Predicted RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	RPLP0	P05388	317 aa	Known RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	IL6R	P08887	468 aa	Predicted RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	RBP1	P09455	135 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	GIMD1	P0DJR0	217 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	ANPEP	P15144	967 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	POLR2E	P19388	210 aa	Known RBP	4.97	□□□□□ -1.61
FN1-219	ENST00000474036	HLA-F	P30511	346 aa		4.97	□□□□□ -1.61
FN1-219	ENST00000474036	FMO4	P31512	558 aa		4.97	□□□□□ -1.61

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