RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PLAG1Q6DJT9 500 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TCTN3Q6NUS6 607 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TUBA3EQ6PEY2 450 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PTCHD4Q6ZW05 846 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ANKRD53Q8N9V6 530 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 FBXO15Q8NCQ5 510 aaPredicted RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 OR9A1PQ8NGU1 263 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 WDR36Q8NI36 951 aaKnown RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 CAPSLQ8WWF8 208 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DTD2Q96FN9 168 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 PDXPQ96GD0 296 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TXNDC15Q96J42 360 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 COQ10AQ96MF6 247 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 EFCAB11Q9BUY7 163 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 SERHL2Q9H4I8 314 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF556Q9HAH1 456 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 SLC25A19Q9HC21 320 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 DNAJC27Q9NZQ0 273 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
C9orf3-214ENST00000473778 LSM2Q9Y333 95 aaKnown RBP10.41□□□□□ -0.74
C9orf3-214ENST00000473778 WASHC1A8K0Z3 465 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 RFXAPO00287 272 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 KPNA3O00505 521 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ITGA2P17301 1181 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 XPAP23025 273 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ERVFC1P60507 584 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 CDC42P60953 191 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 WDR5P61964 334 aaKnown RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 IFITM2Q01629 132 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF45Q02386 682 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF77Q15935 545 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZMAT1Q5H9K5 638 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 CCBE1Q6UXH8 406 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 WASH2PQ6VEQ5 465 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF367Q7RTV3 350 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 TRMT11Q7Z4G4 463 aaKnown RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 C11orf96Q7Z7L8 435 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 FAM129CQ86XR2 697 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 KBTBD8Q8NFY9 601 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 OR5AR1Q8NGP9 310 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 REPS1Q96D71 796 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 MAPRE3Q9UPY8 281 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 VCANP13611 3396 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 SAGE2PA6NJ88 616 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 A6NL46 340 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 H3BQ06 376 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF197O14709 1029 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 MFN2O95140 757 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 PAPLNO95428 1278 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 CXCL14O95715 111 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 TP53P04637 393 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 IFNW1P05000 195 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 HBQ1P09105 142 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 PTX3P26022 381 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ELAVL4P26378 380 aaKnown RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 BMPR1AP36894 532 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 RPS19P39019 145 aaKnown RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 NR4A2P43354 598 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 PNLIPRP1P54315 467 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 LRRC74AQ0VAA2 488 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 COL9A2Q14055 689 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 TMIGD1Q6UXZ0 262 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 HMGN2P46Q86SG4 172 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 SLC9B2Q86UD5 537 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 AMER3Q8N944 861 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ST13P5Q8NFI4 369 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 TMEM19Q96HH6 336 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 FZD3Q9NPG1 666 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 LHX9Q9NQ69 397 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 MIEF1Q9NQG6 463 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 SIRT3Q9NTG7 399 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-214ENST00000473778 SAGE1Q9NXZ1 904 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 TBC1D24Q9ULP9 559 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 MAFFQ9ULX9 164 aa10.4□□□□□ -0.74
C9orf3-214ENST00000473778 FEZF1A0PJY2 475 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CCRL2O00421 344 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 SNPHO15079 494 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 PPM1DO15297 605 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 LRRTM2O43300 516 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CSO75390 466 aaKnown RBP10.39□□□□□ -0.75
C9orf3-214ENST00000473778 PTTG1O95997 202 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ACRP10323 421 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CSF2RAP15509 400 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CD72P21854 359 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 PSMB5P28074 263 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 S100A5P33763 92 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 PTGER1P34995 402 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 ETV6P41212 452 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 CNTN1Q12860 1018 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 BCL7AQ4VC05 210 aa10.39□□□□□ -0.75
C9orf3-214ENST00000473778 FLYWCH1Q4VC44 716 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms