RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 POC1AQ8NBT0 407 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 RELL2Q8NC24 303 aaPredicted RBP5.84□□□□□ -1.47
SMC5-202ENST00000471372 TMEM37Q8WXS4 190 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 C4orf36Q96KX1 117 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 LURAP1Q96LR2 239 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 EDEM2Q9BV94 578 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 NLNQ9BYT8 704 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 PUS3Q9BZE2 481 aaKnown RBP5.84□□□□□ -1.47
SMC5-202ENST00000471372 WDR76Q9H967 626 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 CALHM2Q9HA72 323 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 GDF3Q9NR23 364 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 RDH8Q9NYR8 311 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 MIOXQ9UGB7 285 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 KIAA1210Q9ULL0 1709 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 LYNP07948 512 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 FAM157CP0CG43 387 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ATP6V1C1P21283 382 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 AADACP22760 399 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 FEN1P39748 380 aaKnown RBP5.83□□□□□ -1.48
SMC5-202ENST00000471372 PTGFRP43088 359 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 UBE2HP62256 183 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 RIPK1Q13546 671 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ZSWIM7Q19AV6 140 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ANKRD55Q3KP44 614 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 FAM106AQ4KMX7 169 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 CFAP157Q5JU67 520 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 SPANXN4Q5MJ08 99 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 AWAT2Q6E213 333 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 LPCAT2Q7L5N7 544 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ITIH5Q86UX2 942 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ZDHHC17Q8IUH5 632 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 DND1Q8IYX4 353 aaKnown RBP5.83□□□□□ -1.48
SMC5-202ENST00000471372 KLHDC9Q8NEP7 349 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 OR2T3Q8NH03 318 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 COG3Q96JB2 828 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 CNDP1Q96KN2 507 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 FNDC4Q9H6D8 234 aaPredicted RBP5.83□□□□□ -1.48
SMC5-202ENST00000471372 SMC3Q9UQE7 1217 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 RNF115Q9Y4L5 304 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 ASB3Q9Y575 518 aa5.83□□□□□ -1.48
SMC5-202ENST00000471372 UBXN8O00124 270 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 KLF11O14901 512 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ARPC1BO15143 372 aaKnown RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 SIGLEC5O15389 551 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ZNF821O75541 412 aaPredicted RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 HPRP00739 348 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ALPLP05186 524 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 EDN1P05305 212 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 IQCF3P0C7M6 154 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 PRKAR1AP10644 381 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 SOX3P41225 446 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 PTGER3P43115 390 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ILF3Q12906 894 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMC5-202ENST00000471372 DRP2Q13474 957 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 TRIP10Q15642 601 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 RABL6Q3YEC7 729 aaPredicted RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 DCAF12Q5T6F0 453 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ARHGEF16Q5VV41 709 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ASPHD2Q6ICH7 369 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 Q6ZVQ6 151 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 TRPT1Q86TN4 253 aaKnown RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 RBM23Q86U06 439 aaKnown RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 C17orf64Q86WR6 236 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 MARVELD2Q8N4S9 558 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ZNF397Q8NF99 534 aaPredicted RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 OMA1Q96E52 524 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 FCRL4Q96PJ5 515 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 DUX5Q96PT3 197 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 ZPBPQ9BS86 351 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 TDRD1Q9BXT4 1180 aaKnown RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 VPS33BQ9H267 617 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 FAM124BQ9H5Z6 455 aaPredicted RBP5.82□□□□□ -1.48
SMC5-202ENST00000471372 MAN2C1Q9NTJ4 1040 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 MED17Q9NVC6 651 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 SMCHD1A6NHR9 2005 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 PTPRUQ92729 1446 aa5.82□□□□□ -1.48
SMC5-202ENST00000471372 SF3B1O75533 1304 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMC5-202ENST00000471372 RNF222A6NCQ9 220 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 SDHDO14521 159 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 CCSO14618 274 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 SH2D1BO14796 132 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 MAGEB3O15480 346 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 TBX19O60806 448 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 ATP1A1P05023 1023 aaKnown RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 GP9P14770 177 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 RPA2P15927 270 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 DPP4P27487 766 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 PTPN6P29350 595 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 DHPSP49366 369 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 SULT1E1P49888 294 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 RPS4XP62701 263 aaKnown RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 SPIBQ01892 262 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 NFATC2Q13469 925 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 KLF5Q13887 457 aaPredicted RBP5.81□□□□□ -1.48
SMC5-202ENST00000471372 PDK4Q16654 411 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 BOLA3Q53S33 107 aa5.81□□□□□ -1.48
SMC5-202ENST00000471372 ARHGAP17Q68EM7 881 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms