RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OR8K3Q8NH51 312 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 WDR34Q96EX3 536 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 POM121Q96HA1 1249 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SGCZQ96LD1 299 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 KCNC2Q96PR1 638 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 GPATCH1Q9BRR8 931 aaKnown RBP11.31□□□□□ -0.6
HDAC3-204ENST00000469207 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SLC6A15Q9H2J7 730 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 SH2D2AQ9NP31 389 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 NINQ8N4C6 2090 aa11.31□□□□□ -0.6
HDAC3-204ENST00000469207 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 E7ESA3 106 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 SUSD5O60279 629 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 CTAG2O75638 210 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 FAM155BO75949 473 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 IGKV3-11P04433 115 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 GSTM2P28161 218 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 POU4F1Q01851 419 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 DLG1Q12959 904 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 SERTAD2Q14140 314 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 MPEG1Q2M385 716 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 HYAL4Q2M3T9 481 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 C1orf185Q5T7R7 199 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 SULT1C3Q6IMI6 304 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 NAXEQ8NCW5 288 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 OR10G3Q8NGC4 313 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 KIAA1191Q96A73 305 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 JSRP1Q96MG2 331 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 TBCDQ9BTW9 1192 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 POLDIP3Q9BY77 421 aaKnown RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 CD244Q9BZW8 370 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 PITHD1Q9GZP4 211 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 EHD1Q9H4M9 534 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 GSX1Q9H4S2 264 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 LYRM4Q9HD34 91 aa11.3□□□□□ -0.6
HDAC3-204ENST00000469207 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-204ENST00000469207 A0A1W2PS29 197 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 LRRC3CA6NJW4 275 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 GLOD5A6NK44 160 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 EFCAB8A8MWE9 144 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 UQCRC1P31930 480 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 SSR2P43308 183 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 STT3AP46977 705 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 HNRNPH2P55795 449 aaKnown RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 FOLH1Q04609 750 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 TGM3Q08188 693 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 RCN2Q14257 317 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 CEBPEQ15744 281 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 HIST2H2ACQ16777 129 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 BICRALQ6AI39 1079 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 HIST2H2AA3Q6FI13 130 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 TCAIMQ8N3R3 496 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 FAM13CQ8NE31 585 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 TNIP2Q8NFZ5 429 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 OR7G3Q8NG95 312 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 RBM18Q96H35 190 aaKnown RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 UBXN10Q96LJ8 280 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 DGAT2Q96PD7 388 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 KRT12Q99456 494 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 KCNF1Q9H3M0 494 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 ALG9Q9H6U8 611 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 RPF2Q9H7B2 306 aaKnown RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 CNOT10Q9H9A5 744 aaKnown RBP11.29□□□□□ -0.6
HDAC3-204ENST00000469207 POPDC3Q9HBV1 291 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 PLEKHA6Q9Y2H5 1048 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 FREM3P0C091 2139 aa11.29□□□□□ -0.6
HDAC3-204ENST00000469207 LRRC14BA6NHZ5 514 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 UBXN8O00124 270 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 WDR1O75083 606 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 C1QAP02745 245 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 STMN1P16949 149 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 TCP1P17987 556 aaKnown RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 BMP5P22003 454 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 CASP2P42575 452 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 KIR2DL3P43628 341 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 AGFG1P52594 562 aaKnown RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 HERVK_113P63132 956 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ERVK-8P63133 956 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 KCNJ2P63252 427 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 LAPTM5Q13571 262 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 ZNF267Q14586 743 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 DEPDC1Q5TB30 811 aa11.28□□□□□ -0.6
HDAC3-204ENST00000469207 KHDRBS2Q5VWX1 349 aaKnown RBP11.28□□□□□ -0.6
HDAC3-204ENST00000469207 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms