RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 OR2L5Q8NG80 312 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 SLC22A8Q8TCC7 542 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 KIAA1191Q96A73 305 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 SIGLEC10Q96LC7 697 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 SERINC2Q96SA4 455 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 EGFL8Q99944 293 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 REXO4Q9GZR2 422 aaKnown RBP12.24□□□□□ -0.45
MRPL55-224ENST00000464148 EPB41L4BQ9H329 900 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 ACKR4Q9NPB9 350 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
MRPL55-224ENST00000464148 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 EEF1E1-BLOC1S5C9J1V9 151 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 DYNC1I1O14576 645 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 EEF1E1O43324 174 aaKnown RBP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 LDB3O75112 727 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 GOSR1O95249 250 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 C1GALT1C1LP0DN25 315 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 PGAM1P18669 254 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 CD53P19397 219 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 GDF1P27539 372 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 MAGEA3P43357 314 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 AGFG1P52594 562 aaKnown RBP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 MTTPP55157 894 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 SERTAD2Q14140 314 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 SLBPQ14493 270 aaKnown RBP eCLIP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 CRYMQ14894 314 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 ZNF791Q3KP31 576 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 PIGGQ5H8A4 983 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 KRTAP1-3Q8IUG1 177 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 P3H2Q8IVL5 708 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 KRT78Q8N1N4 520 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 LRRC25Q8N386 305 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-224ENST00000464148 VWA5B2Q8N398 1253 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 PAQR8Q8TEZ7 354 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 HSPBAP1Q96EW2 488 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 QPCTLQ9NXS2 382 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 NCKAP5O14513 1909 aa12.23□□□□□ -0.45
MRPL55-224ENST00000464148 CLEC3AO75596 197 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 TRAPPC6AO75865 159 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 WDR47O94967 919 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 ETHE1O95571 254 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 COX7A2P14406 83 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 GSTM2P28161 218 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 CXCR5P32302 372 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 ZNF136P52737 540 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 SORDQ00796 357 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 ID2Q02363 134 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 TGM3Q08188 693 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 DUSP8Q13202 625 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 SF3B4Q15427 424 aaKnown RBP eCLIP12.22□□□□□ -0.451e-12■■■■■ 60.4
MRPL55-224ENST00000464148 Q5PR19 223 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 POMZP3Q6PJE2 187 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 SLCO4C1Q6ZQN7 724 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 PM20D2Q8IYS1 436 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 ZNF721Q8TF20 911 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 SPACA9Q96E40 222 aaPredicted RBP12.22□□□□□ -0.45
MRPL55-224ENST00000464148 TIMP4Q99727 224 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 PRM3Q9NNZ6 103 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
MRPL55-224ENST00000464148 CNIH4Q9P003 139 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 IKZF3Q9UKT9 509 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 CAMK2AQ9UQM7 478 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 VWA7Q9Y334 891 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 SPACA6W5XKT8 324 aa12.22□□□□□ -0.45
MRPL55-224ENST00000464148 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
MRPL55-224ENST00000464148 NPEPPSL1A6NEC2 478 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 LRRC3CA6NJW4 275 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 CDC7O00311 574 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SMAD7O15105 426 aaKnown RBP12.21□□□□□ -0.45
MRPL55-224ENST00000464148 DYRK3O43781 588 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 LRATO95237 230 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 MSH2P43246 934 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 HNMTP50135 292 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 PPP2R2BQ00005 443 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 FAM45BPQ6NSW5 357 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 TTC27Q6P3X3 843 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 ABHD17CQ6PCB6 329 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SLC15A4Q8N697 577 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 NUBPLQ8TB37 319 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 FAM45AQ8TCE6 357 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.45
MRPL55-224ENST00000464148 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 DGAT2Q96PD7 388 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 TRIB1Q96RU8 372 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 DOHHQ9BU89 302 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 SLC17A6Q9P2U8 582 aa12.21□□□□□ -0.45
MRPL55-224ENST00000464148 FBN1P35555 2871 aaKnown RBP12.2□□□□□ -0.46
MRPL55-224ENST00000464148 H7C1Q1 480 aa12.2□□□□□ -0.46
MRPL55-224ENST00000464148 PGRMC1O00264 195 aaKnown RBP12.2□□□□□ -0.46
MRPL55-224ENST00000464148 SMPD2O60906 423 aa12.2□□□□□ -0.46
MRPL55-224ENST00000464148 TTC4O95801 387 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms